PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0006s0318.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 714aa    MW: 77784.1 Da    PI: 9.0501
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0006s0318.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-18485536256
                   AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                           +y+GVr ++ +g+++AeIrdp  ng  +r++lg+f taeeAa a++ a+++++g+
  Sphfalx0006s0318.1.p 485 HYRGVRHRP-WGKFAAEIRDPARNG--ARVWLGTFATAEEAALAYDSAALQMRGH 536
                           8*****888.**********97676..**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.62E-26484543No hitNo description
Gene3DG3DSA:3.30.730.107.1E-31484544IPR001471AP2/ERF domain
PROSITE profilePS5103223.881485543IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-22485544IPR016177DNA-binding domain
PfamPF008473.4E-13485536IPR001471AP2/ERF domain
SMARTSM003809.6E-34485549IPR001471AP2/ERF domain
PRINTSPR003671.2E-9486497IPR001471AP2/ERF domain
PRINTSPR003671.2E-9509525IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 714 aa     Download sequence    Send to blast
MEWQWGEGVW NHVEAELNHH HHHDLGGATT SRIDILSSSG ANEDVKKNSC LQQQQQQQTA  60
AGNHENHRTS TMMMEMARPK VQQKAWMVAN KLRHSLGHAR FAEAIGEVVT KHLDVDHSRA  120
SSPATQERAS PVVAAPVVVS SAGICSSHTP PATAAVSFPD EETPSAAKAS SMDPPHGRLL  180
SCRQPIEETA QHRCNSRQFE LSVGGQQQQQ QPWRSYPSMH MQSTLSASAS AGGVSLSQIP  240
SIRRPRVEAF DQSSSTPLHL SSPRPPPPPS PLINSSSWIA ARSNSSAHHH HEDSSSSKLL  300
QLQARSSQVD KHRPRICSEH DSNNMARIVD ALTEATAPSR SSLPLRRRLP FPEADAMGFA  360
FRKPELKIAT SSGGMNTTNL SSRSHTTANN KERPSSPATS ITAAANNKER RSSDTSIAAA  420
DNKERRSCDA SIAPADNNER RSSDSFVGTA DNKERRSAKA TASLKEGSGD SEKKKTTIAN  480
IQRKHYRGVR HRPWGKFAAE IRDPARNGAR VWLGTFATAE EAALAYDSAA LQMRGHRAIV  540
NFPLKASLPS SGPSTVAKPL ALKTEIAGRA AADTGLTSKR TREAGTAAAA AADTELTSKR  600
TREVMDAQDH RHQSLAKKVS SCNAAQHADN VTNQTEQKLV GSLEQLQQQN VIKERQQSPF  660
EWQDLGIESL LQLQQNNVTH EMQQNSVEWQ DLGIDYLEQL LSSSEAEIDP RPD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-28484545162ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.12e-23ethylene responsive element binding factor 2