PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0008s0218.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 197aa    MW: 22001.8 Da    PI: 4.8932
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0008s0218.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-171463255
                   AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                          +y+G+r ++ +g+Wv+eIr+ps+   r+r++lg+f taeeAa a++aa  +++g
  Sphfalx0008s0218.1.p 14 QYRGIRMRR-WGKWVSEIREPST---RTRIWLGSFRTAEEAAHAYDAALVCIRG 63
                          69****998.**********976...5**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.3E-311372IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-211472IPR016177DNA-binding domain
CDDcd000184.17E-291473No hitNo description
PfamPF008479.0E-101463IPR001471AP2/ERF domain
PROSITE profilePS5103222.2211471IPR001471AP2/ERF domain
SMARTSM003803.9E-371477IPR001471AP2/ERF domain
PRINTSPR003673.4E-101526IPR001471AP2/ERF domain
PRINTSPR003673.4E-103753IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MSGRNQRGGS SQRQYRGIRM RRWGKWVSEI REPSTRTRIW LGSFRTAEEA AHAYDAALVC  60
IRGPNAQLNF PNDPPTIPRG TPGRYSTREI QAAAAASAAA SVGRPFSYSD FMSPEASDSD  120
DGQDLEDITY TEPAQAAQPA PSNSTQSHNS WSNAGQFDDP YEREWVNNMI YPTRPKDDSD  180
DDNDSFVEPS LWSYRR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-151371463ATERF1
3gcc_A6e-151371463ATERF1
5wx9_A8e-15973974Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11221RQYRGIRMRR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00151DAPTransfer from AT1G19210Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024359814.16e-53ethylene-responsive transcription factor ERF017-like
TrEMBLA0A2K1L4G91e-51A0A2K1L4G9_PHYPA; Uncharacterized protein
STRINGPP1S1_34V6.12e-52(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-22ERF family protein