PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0010s0210.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family TALE
Protein Properties Length: 818aa    MW: 90460.6 Da    PI: 8.0123
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0010s0210.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox24.35.2e-087397712254
                           SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
              Homeobox  22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                           ++yp  +++  LAk++ Lt +qV++WF N R +
  Sphfalx0010s0210.1.p 739 HPYPRDADKLSLAKQTCLTRSQVSNWFINARVR 771
                           79*****************************88 PP
2BELL62.11.3e-20595664271
                  BELL   2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeq 71 
                           r++l  kk  Ll +l+eV+ r+ +y+e+  ++++sF++ ag ++a pY  lA +++SrhFr ++da  ++
  Sphfalx0010s0210.1.p 595 REALLLKKENLLAILNEVEARHLKYQENFTVMMNSFNIHAGAETAMPYLDLAFQTMSRHFRTVRDATRKH 664
                           567889***********************************************************98776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF075262.7E-22483660IPR006563POX domain
SMARTSM005741.1E-4538663IPR006563POX domain
PROSITE profilePS5007111.612712775IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.5E-25714786IPR009057Homeodomain-like
CDDcd000861.06E-9715776No hitNo description
SMARTSM003898.9E-5715779IPR001356Homeobox domain
SuperFamilySSF466891.84E-15716783IPR009057Homeodomain-like
PfamPF059207.4E-16732771IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 818 aa     Download sequence    Send to blast
MWGYVASSAC VVVRESREFA SSRRASERER ERGGARKDDE VLTDFHGREV CKHKYYFDRF  60
FFLRFLENLF GVFRGRKHSW RKKLGCSSSS FFFFFFFFFL PAASIVCIMG GGSATDHLFM  120
VGGPKAEGSA TAASSTCLVD CINNRDDDSG NPVFFSSASS TSVRQAEAVQ LYYVQQNPDF  180
SPHGYSCSNA AAAASGPVTV LYSAPVSGGG GAIPASAGVH HEQLMLPCSQ MMTQEQCFEP  240
LLPAQAETHE SRHLRATPVY ASNQGSPCGY LKTSATENQA AYGNWWNGTN VAQEHHLLQA  300
AGTEEDASAG RSAIVHDLGQ LHRETLVGDG SQGLLALSLS SQYKPQTSSS SLHLHSGRQA  360
LYAGGDLEMN TGVAAMSQTE AQTTTGAGVA VNDIITQFSS RSYPAADEPR IARVTRFRTP  420
APRGDDPSRS AIRHESELAG GCGGSAGRRE LLLRPQQVFE FCNGSRRSDQ AAEDISRIAN  480
CFATSRFLRA AQELLLEVCR VVAPMKRSKS TVHNMTNWPQ QNVLQAPRNF SENMINVTQP  540
AAQTSAIEFQ AAAREPAQMG LEISSSSSAP LTPITYHPQC VAQNLVNTTA GNETREALLL  600
KKENLLAILN EVEARHLKYQ ENFTVMMNSF NIHAGAETAM PYLDLAFQTM SRHFRTVRDA  660
TRKHLRVVTE ALGEEDFSRA GRGETSRCQH IADNQLHCQQ QALQQLGILQ QHQSWRPQRG  720
LPERAVTILR DWMTKHFLHP YPRDADKLSL AKQTCLTRSQ VSNWFINARV RLWKPMVEEM  780
YMEEQRIAAQ EASERRQLAE AAGIPSKSLE LFRRKLY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16400.14e-49BEL1-like homeodomain 7