PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0011s0020.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 723aa    MW: 76841.8 Da    PI: 5.7416
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0011s0020.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.3e-18242292155
                   AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                           + y+GVr+++ +g Wv eIr p++   ++r++lg+f +ae+Aa+a++aa+++l+g
  Sphfalx0011s0020.1.p 242 PVYRGVRRRP-WGIWVTEIRRPKK---KTRIWLGSFASAEMAARAYDAAALALRG 292
                           68********.**********854...6*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008476.0E-13242292IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.3E-30243302IPR001471AP2/ERF domain
SMARTSM003804.4E-33243306IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-19243301IPR016177DNA-binding domain
PROSITE profilePS5103223.367243300IPR001471AP2/ERF domain
PRINTSPR003671.8E-11244255IPR001471AP2/ERF domain
CDDcd000186.83E-16244302No hitNo description
PRINTSPR003671.8E-11282302IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 723 aa     Download sequence    Send to blast
MVEKASFLSS SRRLAVLFSL SQAARRINVG GGEAGGTVSA TVGGGEPHTG SWGLRIVDNT  60
EVELLGDAAE SLATVEPTQE EEGELAGESA YSWPYSRATG NHCHTLIGSW IPPCRPHGGG  120
NDDHELEPCP LSAFPGTRSR KRENSDHGED EYVHFGESYT LVHGCEQSIG PEHCWEPGSE  180
STVTIPGDEI RKQESHFMQQ AAESSTAADA SGSSQQQDDD LSIEHVAKRG KVITGGKDTR  240
HPVYRGVRRR PWGIWVTEIR RPKKKTRIWL GSFASAEMAA RAYDAAALAL RGPGAILNFP  300
KSASSLPRPA DLSDKSIQAA ATAAANISRA TSSPRGAASP RLVSTIRPEV NENIGEGSSS  360
FRTASSPQQY EFPSKPSSRT ASKDVFSKVL ETKSSTSSSS AVHALGSTHL SPRPNSQKQL  420
IPDVIVSGRA VGSSTSSDEI AESSFARPRD PLPPRIPDTP VLSPGGPAAA ATSRSPRKGV  480
QRRPEHQIES KGLAPAGSSL MQLQPEAAGF AASPSILAAA GQQLVTSSPW VPSHTPSLRY  540
ARMQGSSSHS PDIIPMHPGL TLNSDQELRD SAHGVSTLPI RNTNKASTSA GHDLQEPGIA  600
GALEASCEDQ LPAVLKQLVV PHMSLGMTSV MQEPASAADY EAAAISMITD DDDDHHVDED  660
LNIFHIPNVL SNMYNTMGLS PPFMQQQQGI NNIVDPDCSN TRDQSSDDDD STSYGNSQLW  720
TF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-17236300772Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.17e-21ERF family protein