PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0011s0144.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

WRKY

Protein Properties

Length: 877aa MW: 91985.9 Da PI: 9.5616

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0011s0144.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.6	3.8e-31	434	492	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDg++WrKYGqK vk+s++pr+YYrCt+++Cpv+k+vers ed +v++tYeg+H+h+ Sphfalx0011s0144.1.p 434 MDDGFKWRKYGQKAVKNSPHPRNYYRCTTPNCPVRKRVERSCEDSGLVITTYEGTHTHQ 492 59********************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	1.7E-33	419	494	IPR003657	WRKY domain
SuperFamily	SSF118290	7.19E-29	427	494	IPR003657	WRKY domain
PROSITE profile	PS50811	30.997	429	494	IPR003657	WRKY domain
SMART	SM00774	3.5E-37	434	493	IPR003657	WRKY domain
Pfam	PF03106	8.0E-25	435	492	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 877 aa Download sequence Send to blast
MAGQPPNEEG EDSGMHSLQE SYLDQILRSL KSEQEEISAA PSSAASTHDA SAAAGSSSYV 60 TRMPPGSSSN IQAAPPDQLG GSGGGSAGSA LSPWPFISSS ASRHPATGLP RSLQTKQEAG 120 KQESEQLYRG VVDTPGSSSS FHRDLQFMSE FPAWFIQDEG LEQQGAGVVV GGSQIPGAGP 180 SSYSSRFSDR PEDVEFLAGR PHESFDAQLG NFRMSSSSAG LDVAAQAAAG RRSRSSTAMQ 240 PTSSESLYGA GPQQGRMWHP ASLESITSMQ QTPISAAAPR PGPRGPSDAV EPPAAAGVAA 300 RGRSTTMNPE TPTSSLSLGS SSEGDDDAER RSSSRGRHQT AASPVAEEGA SSAKRKTPER 360 SLEEAGGEEQ STKSGSESKR LQQHSLKRDV QLADVNLLGS ARVVSRNRPR KKGGAKRVRE 420 PRYAIKTRTD VDIMDDGFKW RKYGQKAVKN SPHPRNYYRC TTPNCPVRKR VERSCEDSGL 480 VITTYEGTHT HQTPGFHRSS PSHGFFGERP VLGLGGGLFA PPHGSSHMAP GLAGLNFPAP 540 SNFASLQHSV AARGPGTSSL VGLGAAAPGQ QLVDQSAAPS LAGASTSSIS LQEGLLRAHR 600 SLLGLQESFV VKQEPMQFTA GSHQDFLSRS SSSGLPQLIP RQMPQGQGQA AAGIRSAPDS 660 SSSAAMLQFG RQRQLQQAGG SGSASGSSAQ AGPFTALIQQ QTQRQMITNP GPSGGQQLQG 720 ESGSSLLSRA RAGSPGQETI STRGDRNPSS SSNTLISLQA AAAAGSHHHQ QQQQQQQQQQ 780 QLDFVRSVTL NMQRSQQDRR QQLLEADRQQ QQQQAAARLN ILRSSSSGGA GGQQISEESL 840 QKSSQEISRG ATDQGLLEDI VRPGSGQGPP PAPPGM*

Sequence ? help Back to Top

Protein Sequence Length: 877 aa Download sequence Send to blast

MAGQPPNEEG EDSGMHSLQE SYLDQILRSL KSEQEEISAA PSSAASTHDA SAAAGSSSYV  60
TRMPPGSSSN IQAAPPDQLG GSGGGSAGSA LSPWPFISSS ASRHPATGLP RSLQTKQEAG  120
KQESEQLYRG VVDTPGSSSS FHRDLQFMSE FPAWFIQDEG LEQQGAGVVV GGSQIPGAGP  180
SSYSSRFSDR PEDVEFLAGR PHESFDAQLG NFRMSSSSAG LDVAAQAAAG RRSRSSTAMQ  240
PTSSESLYGA GPQQGRMWHP ASLESITSMQ QTPISAAAPR PGPRGPSDAV EPPAAAGVAA  300
RGRSTTMNPE TPTSSLSLGS SSEGDDDAER RSSSRGRHQT AASPVAEEGA SSAKRKTPER  360
SLEEAGGEEQ STKSGSESKR LQQHSLKRDV QLADVNLLGS ARVVSRNRPR KKGGAKRVRE  420
PRYAIKTRTD VDIMDDGFKW RKYGQKAVKN SPHPRNYYRC TTPNCPVRKR VERSCEDSGL  480
VITTYEGTHT HQTPGFHRSS PSHGFFGERP VLGLGGGLFA PPHGSSHMAP GLAGLNFPAP  540
SNFASLQHSV AARGPGTSSL VGLGAAAPGQ QLVDQSAAPS LAGASTSSIS LQEGLLRAHR  600
SLLGLQESFV VKQEPMQFTA GSHQDFLSRS SSSGLPQLIP RQMPQGQGQA AAGIRSAPDS  660
SSSAAMLQFG RQRQLQQAGG SGSASGSSAQ AGPFTALIQQ QTQRQMITNP GPSGGQQLQG  720
ESGSSLLSRA RAGSPGQETI STRGDRNPSS SSNTLISLQA AAAAGSHHHQ QQQQQQQQQQ  780
QLDFVRSVTL NMQRSQQDRR QQLLEADRQQ QQQQAAARLN ILRSSSSGGA GGQQISEESL  840
QKSSQEISRG ATDQGLLEDI VRPGSGQGPP PAPPGM*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
2ayd_A	1e-25	422	494	2	74	WRKY transcription factor 1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69310.2	6e-36	WRKY DNA-binding protein 57

Link Out ? help Back to Top
Phytozome	Sphfalx0011s0144.1.p