PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0013s0219.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family bZIP
Protein Properties Length: 460aa    MW: 49776.5 Da    PI: 5.9962
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0013s0219.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.41.8e-14273321553
                           CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                           kr rr+ +NRe+ArrsR+RK+a +  Le  v++L  eN++L k+l  ++
  Sphfalx0013s0219.1.p 273 KRVRRMLSNRESARRSRRRKQAHLSDLEMQVAQLRVENTSLVKRLIDIN 321
                           99***************************************99986655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-12264319No hitNo description
SMARTSM003389.9E-18269333IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.128271317IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.97E-11273318No hitNo description
PfamPF001703.1E-13273320IPR004827Basic-leucine zipper domain
PROSITE patternPS000360276291IPR004827Basic-leucine zipper domain
PfamPF124981.7E-6394429IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    Send to blast
MERVSSVDDI LGTYWKLDPQ GQGHSNNAAG GPPVPGAEDL KMGLSSGDNK RMNRSASEWA  60
FQEFLKEHDV DGGSTVPQSG VYCSRSRIYE ENEEKDEDED EAESDKVSGS SSAVHFIPRN  120
QEMKPCIIAD EVEVKSALNP LFSGLRDEVN GGNQITNPQE YEQFLKCKLD LACAAVALTR  180
SISGGGGGLK LMSTGSQHLI PATDASCAPE VVAQRKSEDP IGIPALPPKP YCGATSPLPQ  240
SQTRPITSGS EISDEEDPEM EHGQSMSNPG DEKRVRRMLS NRESARRSRR RKQAHLSDLE  300
MQVAQLRVEN TSLVKRLIDI NHKFSAAAVD NRVLKSDVEA LRVKVKMAEE LAARTRQSQM  360
NEPPLGGMMM RYSMVGGGSH VMGSGATDAG AYIQQQQGNN NTGGCKMGRT PSMQRVASLE  420
HLQKRSRAGG SCNMASWASG WDFEGPSLVN HHSGSGNIY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1285292RRSRRRKQ
2287292SRRRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.26e-39bZIP family protein