PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0015s0114.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 742aa    MW: 80311.5 Da    PI: 5.4457
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0015s0114.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.45.6e-16401451255
                   AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                           +y+GVr ++ +g+++AeIrd       +  r +lg+f+ta eAa a+++a+++l+g
  Sphfalx0015s0114.1.p 401 HYRGVRPRP-WGKFAAEIRDsT-R---QgGRLWLGTFDTALEAALAYDNAALRLRG 451
                           69****999.**********33.2...239************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.1E-33401465IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-28401460IPR001471AP2/ERF domain
PROSITE profilePS5103222.524401459IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-20401460IPR016177DNA-binding domain
CDDcd000184.73E-28401460No hitNo description
PfamPF008472.5E-10401451IPR001471AP2/ERF domain
PRINTSPR003671.4E-11402413IPR001471AP2/ERF domain
PRINTSPR003671.4E-11441461IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 742 aa     Download sequence    Send to blast
MGSVLSQEEI TTNISTNIMD RRATVAAPED QEEKCLNSET MAIMLLLNWA AMAVDDLDEK  60
EKWISLVSSI DEPQLDVLLQ MPWTREVLDH FFQWLVNHKL LNGNSDTCSS IYHPIPEISV  120
GSSQILAVDP ADSAPSNPGM GWSSTQILAV DPAESAPPNP RMCWSSSQIL AVDHAAGSPP  180
PILGLGRSSQ IPITLDPESS APPSLVESSQ VPELHPESSA PTPPPGLTNL VQHENVVAGG  240
DQESWPYQSF FNVATVGYED HDQSSHLLHV AAAAPCGGGG GGGGGGGVEQ PKMFADEQVS  300
TAHQSFWLHD PSSANVDSGA ADDMFLSNLL KEALGEQEEP TPNLLPWMIV DKEVPLKGKQ  360
QRSTTAARKT GVVGAGAPLK QQQVAAHSSQ PVGQQQQQPG HYRGVRPRPW GKFAAEIRDS  420
TRQGGRLWLG TFDTALEAAL AYDNAALRLR GSRALLNFPV RAAALVNELL APPEALADDC  480
LPDVDSKPPA GAAQEQDPPQ LGSALAPSSS SNKLSHGKRK PPARSNLHGY ELQDPSSDPG  540
QVQKKCKQAQ YHAVPDQQAS VRQVQESNKS KVSEQIQPSQ SKSGTTTIES NTDQDRLLQM  600
QQNFQNRKPG MVIQKRDSQV EGIKKVKELQ IRCKNFASES SQSPHCQNLS SSTTSQEDDN  660
VVADHHHQQQ LQQPLKSKLL SQDQEQLHHA SSSKPAAGMV TNPWNWYPWN CSPRSPLWNF  720
SPRSPLCPSP SLSSPLSHYL F*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-27401461262ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31230.18e-15ethylene-responsive element binding factor 15