PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0017s0172.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 418aa    MW: 45849.7 Da    PI: 6.025
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0017s0172.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.81.5e-09288330350
                   AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaar 50 
                           y+G r++    +Wv+eIr        +k+++lg++ t eeAa+a +a  
  Sphfalx0017s0172.1.p 288 YRGTRQK--EEKWVSEIRPtG----SKKTVWLGTYATQEEAARAFDAGV 330
                           6666643..478****99933....35*****************99865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103214.276287343IPR001471AP2/ERF domain
CDDcd000184.05E-14287345No hitNo description
Gene3DG3DSA:3.30.730.101.4E-17287345IPR001471AP2/ERF domain
SMARTSM003804.6E-11287349IPR001471AP2/ERF domain
SuperFamilySSF541713.4E-12288345IPR016177DNA-binding domain
PfamPF008475.9E-5289328IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    Send to blast
MASVSTAMRG EPGQDKNAAS DLKKICERTV QGFCSAVKSS ISCIPPLLPR RNGDHFSSVV  60
SRMATWPRRA SHRLRERASP NAQLGSDSPA GGRHCRSFPT HGLPFASLTV NKPHSQYNSD  120
IFKTSRPCNS SNGGDEQEEE EEEEEVVATV GGTATASQVN APPFCDDASL EDDIMFWNTQ  180
IENCLQEFGV KDDFQMYMMK GIPELEQKSC CCCSAPAISP GNAWIENLTE FDRVVEYMST  240
AVLASETEHD GAGDSSVTTV SENETASSAV SSQELLQETG VQEARHRYRG TRQKEEKWVS  300
EIRPTGSKKT VWLGTYATQE EAARAFDAGV FYYGKSHIPY NFPDSPQVLP AINEKPQDVC  360
HKFVKNQARR NAERAWPSSG TADPQHPSAI LEQTSSSRTS RGCFQGGKRR KSNSQLS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.15e-14ERF family protein