PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0020s0016.2.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 370aa    MW: 39777.8 Da    PI: 9.6413
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0020s0016.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.9e-20191243156
                   AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                           ++y+GVr ++ +gr++AeIrdp+ ng  +r++lg+f+taeeAa a++ a++k++g+
  Sphfalx0020s0016.2.p 191 PHYRGVRERP-WGRFAAEIRDPTRNG--ARVWLGTFDTAEEAALAYDSAALKMRGH 243
                           68*****888.**********98887..**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.09E-31191250No hitNo description
PfamPF008474.5E-15191243IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.5E-32192251IPR001471AP2/ERF domain
SMARTSM003802.9E-35192256IPR001471AP2/ERF domain
PROSITE profilePS5103224.487192250IPR001471AP2/ERF domain
SuperFamilySSF541715.62E-23192251IPR016177DNA-binding domain
PRINTSPR003671.4E-10193204IPR001471AP2/ERF domain
PRINTSPR003671.4E-10216232IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MGLPQSDSEF ANEAEPFAEN HQVHDDARSS LGVLHQKKKT SRIMFANKLR HRLGQARFTQ  60
TIGEVITKHL EIVSTSSSHS VKEQSAVQAA EIPQLQTVTD HLSLPAGRLV SSSQACVNEE  120
KSIGWPSSPS SDGKLLKCMV NMPAVQLQSG SGAVALQEPP PPPPPPPPPS PVPPHATTAT  180
STAAKQPRKS PHYRGVRERP WGRFAAEIRD PTRNGARVWL GTFDTAEEAA LAYDSAALKM  240
RGHRAIVNFP LKASLPSTKK TSSSAPTVIK PEASTIRATQ WQAEAQMAAA ANTAVFLQSQ  300
RRMKENLIET LDHDTVSVSK KFSSSNSCKG GDFAVAAKDT TKKSPQQNSV ELQDLGAEYL  360
ENLLASSDV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-30189254267ATERF1
3gcc_A8e-30189254267ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.16e-26ethylene responsive element binding factor 2