PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0021s0094.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

ERF

Protein Properties

Length: 796aa MW: 90678.9 Da PI: 4.7014

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0021s0094.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	25.2	4e-08	198	250	1	53
AP2 1 sgykGVrwdkkrgr...WvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 ++y+GVr++++r r W Ae++ p+e + ++++ t e Aa a++ a+ ++ Sphfalx0021s0094.1.p 198 PKYRGVRYRPYRSRtnpWTAELKPPRE---KNKVWIADCSTQEAAAHAYDVAAFYY 250 79*****************999865...489******************988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF00847	4.0E-6	198	251	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	5.56E-8	199	261	IPR016177	DNA-binding domain
SMART	SM00380	1.3E-4	199	266	IPR001471	AP2/ERF domain
PROSITE profile	PS51032	16.647	199	260	IPR001471	AP2/ERF domain
Gene3D	G3DSA:3.30.730.10	1.3E-13	199	261	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 796 aa Download sequence Send to blast
MVLDAEKVRF AVEYVTRVAN DVSSTNMFFV KNCSLRFRNL PLRPAEGSIH SVSTWQPSAS 60 LHSDSVMSFE TEELVHFRGR DPVSAYPLIR FTRDFHFQLG TDPISVRWST QAEMPEPLTF 120 LARFLESLVG LLIVIRFFDQ SLVPLQDVPI FEIVVQVEFY DLTSSERVKR GVKIAWLIGE 180 TLALETGSGQ KQPNIHRPKY RGVRYRPYRS RTNPWTAELK PPREKNKVWI ADCSTQEAAA 240 HAYDVAAFYY GKGNKALNFE HTPRFLPETL EYSCEKRKKH AIQERARHLR RNPLFYLIHQ 300 LPYDLLFCFV IWELYPFQGQ PQIRLALLVV KLMRLVRKDS SVIAFPKWVS FNEEIAHLHA 360 PTNIPQLLES VDCLIKKIPQ QKQGYDYTLK PACELDFLLF SFCESPLEPQ HPTKDIPLTF 420 QFIEWVRSNL VAPQTTSMEA KHLPASPPQC NVRSIMSVEV DLRAPQTSSM AKEAEDPLVN 480 IPRQCNTLPM HYPHEQIQGT LEQDLIISHK FSLESQDLTY QDATPEEQVV QSPIVEQAAT 540 ILLSTPVAAS GETSLFPSPP LDVEIPNEGF QTRDLYEDIQ EGSMPGQMTT ILGTLSNFHR 600 LPFSCFSPLS TGAQTQSTTF MESDVEKDLM MPIPSSMEVG DCHPKCNNLV VPLRPSHDYT 660 DDALKQDLRN LDELPLECEH SAFQVTSPEE DEWIKSPTDQ AATEFLDLDD GEDLTTLFER 720 PQHDQLGDIG DWVASDEATL MEGCNPDIND MVLTSVPGYI EGNEINSLCE YERVMEPPHP 780 FAFSQQPFVQ FDEYL*

Sequence ? help Back to Top

Protein Sequence Length: 796 aa Download sequence Send to blast

MVLDAEKVRF AVEYVTRVAN DVSSTNMFFV KNCSLRFRNL PLRPAEGSIH SVSTWQPSAS  60
LHSDSVMSFE TEELVHFRGR DPVSAYPLIR FTRDFHFQLG TDPISVRWST QAEMPEPLTF  120
LARFLESLVG LLIVIRFFDQ SLVPLQDVPI FEIVVQVEFY DLTSSERVKR GVKIAWLIGE  180
TLALETGSGQ KQPNIHRPKY RGVRYRPYRS RTNPWTAELK PPREKNKVWI ADCSTQEAAA  240
HAYDVAAFYY GKGNKALNFE HTPRFLPETL EYSCEKRKKH AIQERARHLR RNPLFYLIHQ  300
LPYDLLFCFV IWELYPFQGQ PQIRLALLVV KLMRLVRKDS SVIAFPKWVS FNEEIAHLHA  360
PTNIPQLLES VDCLIKKIPQ QKQGYDYTLK PACELDFLLF SFCESPLEPQ HPTKDIPLTF  420
QFIEWVRSNL VAPQTTSMEA KHLPASPPQC NVRSIMSVEV DLRAPQTSSM AKEAEDPLVN  480
IPRQCNTLPM HYPHEQIQGT LEQDLIISHK FSLESQDLTY QDATPEEQVV QSPIVEQAAT  540
ILLSTPVAAS GETSLFPSPP LDVEIPNEGF QTRDLYEDIQ EGSMPGQMTT ILGTLSNFHR  600
LPFSCFSPLS TGAQTQSTTF MESDVEKDLM MPIPSSMEVG DCHPKCNNLV VPLRPSHDYT  660
DDALKQDLRN LDELPLECEH SAFQVTSPEE DEWIKSPTDQ AATEFLDLDD GEDLTTLFER  720
PQHDQLGDIG DWVASDEATL MEGCNPDIND MVLTSVPGYI EGNEINSLCE YERVMEPPHP  780
FAFSQQPFVQ FDEYL*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Link Out ? help Back to Top
Phytozome	Sphfalx0021s0094.1.p