PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0022s0081.5.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

bHLH

Protein Properties

Length: 751aa MW: 80842.6 Da PI: 6.0703

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0022s0081.5.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.8	9.7e-09	502	548	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h +Er RR + ++++++L +++P+ kK + ++L+ +++YI+ L Sphfalx0022s0081.5.p 502 QKHMLAERDRRFKFKEKIHTLCSIVPTT-----KKKDNLSVLTNTIDYIRRL 548 57999********************9.....78899**********98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	12.874	499	548	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	7.82E-8	502	553	No hit	No description
Pfam	PF00010	1.7E-6	502	548	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	4.32E-12	502	560	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	2.5E-12	503	557	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.2E-7	505	554	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 751 aa Download sequence Send to blast
MATSGAAAAS ELAGHGDNVE FNWEERFQAL VQNWSWIDYI VVWKLNPHTP ALVWHRGYFN 60 DRSSSFHPEY SRRIAPIFSS IYRSCVFRSS NSGYAARAVY EQAPLWWTSN QPRLPTDERK 120 DQFLQELGIK TIVCLPGLGT DGNMYCLELA STQLKQESSG MLQALLAFAS GSREQQLLAA 180 GLDEEELAVA QQQQENIQLE SVSTPSSDAE AAGGVPTDMM LNLWASMSDI DDAQMQMSSF 240 MQRSTLDSLV MAHDIMQIGQ PPAAAAATMF GTTTQYPAMP VSATPAFHNV LPYHQLPGQH 300 QSASTPYQRM ETPELSAAST TALEAAPSSS MNRLQAAGLP LAPADPSSHV RQGMLAQLAG 360 DTRMPPAGSA RAVDQQLGNP SESTVRSRAA AVSLHSPFKS FEPISRHPKL RRLDDSRDTG 420 NIAGPSKPRQ PMIELWIKDL CPRIQESDRM KRRLQLGATV AGSSMNPAGA AGGSFMQGDT 480 HVSADQQYYS PGWIEEQAQI AQKHMLAERD RRFKFKEKIH TLCSIVPTTK KKDNLSVLTN 540 TIDYIRRLKE QIAGLEMAGS TSTAAASTHD PAVLQAPAVT SSAGPSSSTA AAELAQAQQQ 600 LRSEAAAAAT THPSSSSINN TTTVAVSWRQ FELAGTEAAG AHGAMRAGTN TGISSNAAGQ 660 LVIEVETPYN NPQSLIQVLS VVQDLGLDLD SLSSGNLNNG RMQISVRVLA PAGSSSSQQL 720 IQLSSVVKEK LETMLALDSR NTPSTTSEMQ *

Sequence ? help Back to Top

Protein Sequence Length: 751 aa Download sequence Send to blast

MATSGAAAAS ELAGHGDNVE FNWEERFQAL VQNWSWIDYI VVWKLNPHTP ALVWHRGYFN  60
DRSSSFHPEY SRRIAPIFSS IYRSCVFRSS NSGYAARAVY EQAPLWWTSN QPRLPTDERK  120
DQFLQELGIK TIVCLPGLGT DGNMYCLELA STQLKQESSG MLQALLAFAS GSREQQLLAA  180
GLDEEELAVA QQQQENIQLE SVSTPSSDAE AAGGVPTDMM LNLWASMSDI DDAQMQMSSF  240
MQRSTLDSLV MAHDIMQIGQ PPAAAAATMF GTTTQYPAMP VSATPAFHNV LPYHQLPGQH  300
QSASTPYQRM ETPELSAAST TALEAAPSSS MNRLQAAGLP LAPADPSSHV RQGMLAQLAG  360
DTRMPPAGSA RAVDQQLGNP SESTVRSRAA AVSLHSPFKS FEPISRHPKL RRLDDSRDTG  420
NIAGPSKPRQ PMIELWIKDL CPRIQESDRM KRRLQLGATV AGSSMNPAGA AGGSFMQGDT  480
HVSADQQYYS PGWIEEQAQI AQKHMLAERD RRFKFKEKIH TLCSIVPTTK KKDNLSVLTN  540
TIDYIRRLKE QIAGLEMAGS TSTAAASTHD PAVLQAPAVT SSAGPSSSTA AAELAQAQQQ  600
LRSEAAAAAT THPSSSSINN TTTVAVSWRQ FELAGTEAAG AHGAMRAGTN TGISSNAAGQ  660
LVIEVETPYN NPQSLIQVLS VVQDLGLDLD SLSSGNLNNG RMQISVRVLA PAGSSSSQQL  720
IQLSSVVKEK LETMLALDSR NTPSTTSEMQ *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28800.1	2e-08	bHLH family protein

Link Out ? help Back to Top
Phytozome	Sphfalx0022s0081.5.p