PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0023s0151.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 271aa    MW: 30135.3 Da    PI: 4.6495
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0023s0151.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95e-184290355
                   AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                          y+GVr +  +g+Wv+eIr+p   +kr r++lg+f tae+Aa+a++aa  +l+g
  Sphfalx0023s0151.1.p 42 YRGVRMRA-WGKWVSEIREP---NKRSRIWLGSFPTAEMAARAYDAAVVALRG 90
                          9****998.**********9...336**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.5E-3241100IPR001471AP2/ERF domain
PROSITE profilePS5103223.1564198IPR001471AP2/ERF domain
SuperFamilySSF541714.18E-2241100IPR016177DNA-binding domain
SMARTSM003802.0E-3741104IPR001471AP2/ERF domain
CDDcd000185.42E-3242100No hitNo description
PRINTSPR003675.0E-104253IPR001471AP2/ERF domain
PfamPF008474.1E-114290IPR001471AP2/ERF domain
PRINTSPR003675.0E-106480IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MMMEKKKAPS LGVKKAAKGK ISGSIQKKKQ QQQSTCSNVK AYRGVRMRAW GKWVSEIREP  60
NKRSRIWLGS FPTAEMAARA YDAAVVALRG PNARLNFPDS PPTLQIHDTL SPQAIQAAAA  120
AAAASAIPPA TALQFPDQSQ ERSTSSGSSS DHEEDNNQEA DNYKMKNHNI VAVEESRTTG  180
RSELEQQQQQ QWRSPAGVEW IEEEFGEFQD FEEVDYFPEL EFSDDEVENS LLQQQPQAAA  240
AAAADHHQTD WDLGVLEDES FELSLWSLPW *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-1542981572Ethylene-responsive transcription factor ERF096
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00430DAPTransfer from AT4G06746Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G06746.12e-22related to AP2 9