PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0024s0064.2.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 333aa    MW: 36704.8 Da    PI: 4.4792
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0024s0064.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.79.4e-162576155
                   AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                          s+y+GV +++ +grW+A+I  +     +k+ +lg++ t eeAa+a++ a+ +++g
  Sphfalx0024s0064.2.p 25 SKYRGVARHHHNGRWEARIGRVLG---NKYLYLGTYSTQEEAAAAYDVAAIQYRG 76
                          89****99**********988422...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.18E-172586IPR016177DNA-binding domain
CDDcd000181.28E-152586No hitNo description
PfamPF008472.2E-112576IPR001471AP2/ERF domain
PROSITE profilePS5103218.4132684IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.1E-192685IPR001471AP2/ERF domain
SMARTSM003801.1E-262690IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MRNMSREEYL ATLRRRSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVLGNK YLYLGTYSTQ  60
EEAAAAYDVA AIQYRGSAAV TNFELSHYTE MQRLGELETS SCMGNNLTAF PEQESNSMPY  120
PNMSISSAGY VSVCSPVSEE SVASYQVASN LSSEPTSILN YTPLDSWPLV PTYISRRLDQ  180
LPSYALQSTQ HSCCANPVAE AIFSEADVSK AAVTVGIPEA QSVITKQFLD EQTAENEVTN  240
TSITAEKGEA ISATSMLESC NGLLANHDYQ HGSEIWMPDD FASFDTNPCL LPDFDPADVW  300
VGMEMEHEDV FLESIIPKSY PSLYPFPIRA CS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.24e-31ERF family protein