PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0024s0110.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 526aa    MW: 57833.8 Da    PI: 5.0447
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0024s0110.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.71.6e-14137189153
                   AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr..krfslgkfgtaeeAakaaiaarkkl 53 
                           s+y GVr+++  ++WvAeIr+  ++   +  k+++lg++ +++eAa a +aark l
  Sphfalx0024s0110.1.p 137 SKYYGVRFRPDLNKWVAEIRVaEWK---SvdKKVWLGTYISEQEAACAVDAARKIL 189
                           7999*****************6433...345**********99**********966 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.12E-11137185No hitNo description
PfamPF008476.5E-8137187IPR001471AP2/ERF domain
SuperFamilySSF541713.73E-9137189IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.0E-12138200IPR001471AP2/ERF domain
PROSITE profilePS5103214.302138200IPR001471AP2/ERF domain
SMARTSM003801.0E-4138206IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 526 aa     Download sequence    Send to blast
MPEPDLSAVL EFCGINNNNH IASSSTSPTR CHDCPAARSL RTSSTFRLQI CCKFVCKQTS  60
PFETKDSNVN KGKNSSFAAD SFLGVTGSVT VLNDVQDNCT NISGAQKRDE EEGQSTAPVQ  120
QGSTTTTRRS RNKECSSKYY GVRFRPDLNK WVAEIRVAEW KSVDKKVWLG TYISEQEAAC  180
AVDAARKILK CTKKKKPNFS SVRLEAYTES LPPELSLDNI SDITIFKAIT EFVKCKAKQY  240
ASEASRMGLP TTLPIVKEIQ RTTFTPRVPM SNSQPAPAGD ELTTSGTTVI QLAGSVNIEF  300
PSISFEPLPY LDHGVNAIEV QMPMKNTSSP VHSHEYEQLR SPFHVTSAAT SMGMADNFLK  360
EEHHGKELNL EGYGVTPLLS SSMMFSQGAS SLDWPPPQQP VPAAPIGSEV ILHQEPFFMN  420
VQDGLNVMLS HQLPEPNTYW PVDDQIVNLD FNYNETLGDS DVWVENYLGS CSEQYNDTIM  480
SEGRETKLVP SFTMSSQGDG INSCMDAFLQ GTVPANSHEN SNQPT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53290.16e-07cytokinin response factor 3