PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0031s0107.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 769aa    MW: 81344.4 Da    PI: 4.7402
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0031s0107.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.4e-19511563156
                   AP2   1 sgykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkklege 56 
                           s+y+GVr+++ +g+++AeIrd       + +r +lg+f+taeeAa+a++ a++k++g+
  Sphfalx0031s0107.1.p 511 SRYRGVRQRP-WGKFAAEIRD----SarQGARLWLGTFDTAEEAAAAYDTAALKMRGP 563
                           79********.**********....33334**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.65E-17511569No hitNo description
SuperFamilySSF541714.12E-22511570IPR016177DNA-binding domain
PfamPF008477.0E-14511562IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-30512569IPR001471AP2/ERF domain
SMARTSM003807.8E-37512576IPR001471AP2/ERF domain
PROSITE profilePS5103223.117512570IPR001471AP2/ERF domain
PRINTSPR003672.8E-10513524IPR001471AP2/ERF domain
PRINTSPR003672.8E-10536552IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 769 aa     Download sequence    Send to blast
MNFFGGTSTR SRTGCLSPST VLKAADAFSS SSSCWRSSTS ERRSKDVAVK GLQDRLLGVD  60
PFEALARGLR GGGGGAEAAD CTKSLKLHKS SDSFLSVSAE RNPSGRLNIT LPGNAFQNQQ  120
QFVVSPNLSS TLSGGSSGGG GDIGCSSRPQ SDVSSLGKPA GPQELLLQNR LSGLKRFRPD  180
DFATEITEPR RKSQKAWVIA RKLRHSLGEN FAECFREKFG DVMKQKTEQL QPQKTNLTTA  240
AAAAANFSAS DLSDGSFEKI SSSSTELLKT TTAGSKDDDG FSDWFVVDDQ DNQEAASAEV  300
MVDAKHHPGC FDDHHDAAYR KAFNDQQQRD LDPAAVAAAG FSSPRCASDQ LLQASKYESL  360
QPKTGPSVVT SHLLQQQQES RYPWDSESSW SWSTATSGTL ENANDAVDDH QPQHSRPEDE  420
LLQALKGGAG VVTAAETAAK PAASPPRSQY RSARPRAFPE ATAMWLMQKL SESQQPPPVS  480
QYIAEEEIQN LSSSTAAAAA AVPPKDPLWR SRYRGVRQRP WGKFAAEIRD SARQGARLWL  540
GTFDTAEEAA AAYDTAALKM RGPKAHLNFL PKVPDVSALD TASTADMDHA SATPAAAVAA  600
AAIAADSTAT TAAAMEEEDS TATTVAAAAT AEDSTVATVA PERADCMANS AAASSCNDFG  660
PISDDVAGVL AAASPSNLFT AQPVSNDTGG GPAAITAAGL EVEVEEEEDL DHAFLEKLLD  720
STQNHAAAEI IPLSPNFSDY CDFSLVFSPL QSMDHHQDCG DHGQLISN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-23513573666ATERF1
3gcc_A1e-23513573666ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.13e-17ERF family protein