PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0033s0095.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 359aa    MW: 39113 Da    PI: 8.3542
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0033s0095.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.5e-181362255
                   AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           y+GVr+++ +g Wv eIr p++   + r++lg+f tae+Aa+a++ a+ +l+g
  Sphfalx0033s0095.1.p 13 LYRGVRRRP-WGVWVTEIRRPKK---KGRIWLGSFATAEMAARAYDSAAFALRG 62
                          69*******.**********954...58************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.88E-321271No hitNo description
PfamPF008471.5E-121262IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-191371IPR016177DNA-binding domain
PROSITE profilePS5103223.381370IPR001471AP2/ERF domain
SMARTSM003803.0E-341376IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.3E-301371IPR001471AP2/ERF domain
PRINTSPR003673.4E-121425IPR001471AP2/ERF domain
PRINTSPR003673.4E-125272IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MDMGVEGDSR HPLYRGVRRR PWGVWVTEIR RPKKKGRIWL GSFATAEMAA RAYDSAAFAL  60
RGPSALLNFP EYFASLPRPL DLSDKSIQAA ATEAARALNR RTGKQLQIRR FSTLQATCIA  120
AAGSSPPPLV TDSGGSRFSD QQSGSRTTAA RSMSIQAGSS AMPSPLVYKD PVTTTDQKPS  180
TIIASSNSTS ANMTKCCTGP QGPIRVVFNR SSSCTSSTAN KASAIATLDM RKQEKRPMIP  240
VPNFRTPVEH TMMSGLQVDS YSKIPHPLQP PSTSSAVMQD DDQAEARVAL EQHNGTYVDE  300
DLIFNCMPSV LAWLYDHSAL CLPPPQYSFT DTDPSSSLDQ AVLYDDESPS WEPHLWSY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-21173175Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-20ERF family protein