PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0033s0186.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 899aa    MW: 101250 Da    PI: 5.7647
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0033s0186.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.91.2e-13126179154
                   AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr..krfslgkfgtaeeAakaaiaarkkle 54 
                           s+y GVr+++   +WvAeIr+      ++  k+ +lg++ ++e+Aa a +aark l+
  Sphfalx0033s0186.1.p 126 SKYYGVRFRPDLSKWVAEIRVaE---SMSvdKKMWLGTYISEEGAAHAVDAARKILR 179
                           7999*****************44...22356**********************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.62E-8126182IPR016177DNA-binding domain
CDDcd000184.36E-10126188No hitNo description
PfamPF008475.0E-7126176IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-12127189IPR001471AP2/ERF domain
PROSITE profilePS5103215.079127189IPR001471AP2/ERF domain
SMARTSM003804.9E-6127195IPR001471AP2/ERF domain
SMARTSM002201.6E-44603894IPR000719Protein kinase domain
PROSITE profilePS5001137.884603890IPR000719Protein kinase domain
Gene3DG3DSA:3.30.200.203.6E-20606711No hitNo description
SuperFamilySSF561121.2E-64606889IPR011009Protein kinase-like domain
CDDcd139991.13E-81609885No hitNo description
PfamPF077143.7E-46636884IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain
Gene3DG3DSA:1.10.510.103.3E-40712882No hitNo description
PROSITE patternPS001080721733IPR008271Serine/threonine-protein kinase, active site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 899 aa     Download sequence    Send to blast
MPESFAQPVD LSHPDLRGFN HKAAASSNTS FVRYRNCPGL QTASFQLQIC CKFVHQNTSQ  60
FEHKESNLGF AAADPFLEAM GDSTSVPSDD VQEDGANISC SRAQQDEVQN TMQATSRRPR  120
NKECSSKYYG VRFRPDLSKW VAEIRVAESM SVDKKMWLGT YISEEGAAHA VDAARKILRC  180
TKKTKPNFSC EQLEAYAESL PVTFVLKNIS DNTIFKALTD VVKGKARLYA SEFVSTPIPK  240
EIRTSTPVNN NRQPGAGGDV SPSDAAAVCQ LGSITTENKE VMGSCEEQVE ADDSEEEVEV  300
EANDSEEEVE VEVEANNSED YNLIDNTEQE GPRSLFHSQG GRSSIPALAM DASCSQFPQD  360
VYRKCHELGL LETAKNKKKQ HEDQFTELKS SSESLKEPNL TKVDGPSTYL ELGTKSLKNV  420
ENMISIQSSN SVLINQLQCH YLFDKLRESL NDAKACIDGL SPQNIQRSCC ILESLAQTWK  480
EGEMLVGDCC DAQWIRMAMI LANAKEHFTS LIFKLRLYMQ LFQSIFKEGA TKEFLIKLQD  540
RKWSDDVKDE EFPIIDEKAL EDQQWLLSRL IEVGSIDSEN LIKRLNHPGK IDAWKVEYKI  600
IQRVPYSQIG KGGSTTVHKV VWLGKHFAEK CFFGPESKHF QEEASLLAKL SHPNILPLFC  660
FVTRAHSCSL VTELMDGDLH GLMFKRLDNH EIQGVPFKLL EAIDIMLQVA EGMHYLHQNK  720
VVHRDLKSMN ILVKCDGHDG HVYAKVADFG LSKTKESSCT YSNLTMDLGT TRWMAPELFG  780
NFDQSVPIQV YQETKHPSLS NEQISKRYPF KVDIYSFGMV CYEILTGNIP FPNHTSMMEL  840
RKKIKDGLRP NLPEQCPQQL SKLIQACYHS DPATRPSFFE ICVELRHVMC SLMIGWTL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4yzm_A5e-3360888526284Probable serine/threonine-protein kinase roco4
4yzm_B5e-3360888526284Probable serine/threonine-protein kinase roco4
4yzn_A5e-3360888526284Probable serine/threonine-protein kinase roco4
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1373379AKNKKKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12020.25e-12WRKY family protein