PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0034s0088.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

BES1

Protein Properties

Length: 430aa MW: 44657.1 Da PI: 7.4812

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0034s0088.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	170.7	8e-53	26	123	2	96
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeae.aagssasa 88 ++ r ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DG tyrkg+kp+ e+++ + + a + Sphfalx0034s0088.1.p 26 SGSRLPTWKERENNKRRERRRRAIAAKIFAGLRSYGNYKLPKHCDNNEVLKALCAEAGWTVEEDGSTYRKGTKPPvEQMQeVCTTPALV 114 789************************************************************************95555055566669 PP DUF822 89 spesslq.s 96 sp+ss+ Sphfalx0034s0088.1.p 115 SPTSSYPgA 123 999999833 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	4.7E-51	27	129	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence Send to blast
MVAARDHQRV DAPGAAAERG DIIMTSGSRL PTWKERENNK RRERRRRAIA AKIFAGLRSY 60 GNYKLPKHCD NNEVLKALCA EAGWTVEEDG STYRKGTKPP VEQMQEVCTT PALVSPTSSY 120 PGASDGTSLI PWLKGLSSGR GSGTASTSSS AGLPTLHLVH AGTSSCAPVT PPLSSPTAKG 180 IPVKPDWDAI AKDGLPECPT HAFSQAHVNA WSAVHHPSFL AAAAAAAASN QSPLCPGSYC 240 ETPDGCRTPA ADEVESDLSP TTALEFANVC SSSSTKWANG IRVRTAGSSA AAGAILGLAA 300 GPPGSAVSGC HVQLEGMMGL GPFPAPAAVQ SDSPETPYPS TWRIPISLQS SAANTPVPAR 360 TVPRLLNSDK VENPDAVVHV PWGEAAAAAE DHVAMQVVSR RKLAVQPDEL ELTLGSSSSR 420 GRSPNLQCQ*

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence Send to blast

MVAARDHQRV DAPGAAAERG DIIMTSGSRL PTWKERENNK RRERRRRAIA AKIFAGLRSY  60
GNYKLPKHCD NNEVLKALCA EAGWTVEEDG STYRKGTKPP VEQMQEVCTT PALVSPTSSY  120
PGASDGTSLI PWLKGLSSGR GSGTASTSSS AGLPTLHLVH AGTSSCAPVT PPLSSPTAKG  180
IPVKPDWDAI AKDGLPECPT HAFSQAHVNA WSAVHHPSFL AAAAAAAASN QSPLCPGSYC  240
ETPDGCRTPA ADEVESDLSP TTALEFANVC SSSSTKWANG IRVRTAGSSA AAGAILGLAA  300
GPPGSAVSGC HVQLEGMMGL GPFPAPAAVQ SDSPETPYPS TWRIPISLQS SAANTPVPAR  360
TVPRLLNSDK VENPDAVVHV PWGEAAAAAE DHVAMQVVSR RKLAVQPDEL ELTLGSSSSR  420
GRSPNLQCQ*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	1e-21	29	99	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	1e-21	29	99	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	1e-21	29	99	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	1e-21	29	99	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00248	DAP	Transfer from AT1G78700	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024357987.1	1e-106	BES1/BZR1 homolog protein 4-like
TrEMBL	A0A2K1ITH7	1e-105	A0A2K1ITH7_PHYPA; Uncharacterized protein
STRING	PP1S335_68V6.1	1e-104	(Physcomitrella patens)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	2e-35	BES1/BZR1 homolog 4

Link Out ? help Back to Top
Phytozome	Sphfalx0034s0088.1.p