PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0037s0121.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 801aa    MW: 87873.4 Da    PI: 5.0449
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0037s0121.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.27.2e-17515566155
                   AP2   1 sgykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 
                           ++y+GVr+++ +g+++AeIrd       + +r++lg+f+ a eAa+a++ a+ +++g
  Sphfalx0037s0121.1.p 515 PHYRGVRQRP-WGKYAAEIRD----SarQGARIWLGTFDRAVEAAEAYDTAAFQMRG 566
                           68********.**********....33334*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.39E-28515574No hitNo description
PfamPF008471.8E-11515566IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-20516575IPR016177DNA-binding domain
SMARTSM003807.5E-35516580IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.5E-29516575IPR001471AP2/ERF domain
PROSITE profilePS5103222.366516574IPR001471AP2/ERF domain
PRINTSPR003672.8E-12517528IPR001471AP2/ERF domain
PRINTSPR003672.8E-12556576IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 801 aa     Download sequence    Send to blast
MAFEIFGSRS GRVQQNGNGR ENWTAMMWGE EYKEQQQEEE EFGKNVLKQF QMQLSKIPLP  60
DVIADSSDGA AAAAATIWQQ NGNTHQMGVA AATSLQQNAS THHPMVIKEE PSWSSWEENH  120
QQQQQQHPLA QSVAASRSGS GRGGGFRCSE GENIGEEKIA AGKFLPVNPH QMKAWMFAKK  180
MRDALGGANF AENFRDKIGE IMKQQQKKTS SSVMMQQGAT KQQQQLSGFT KPESATSSSP  240
SAGIRDDDLE RNSKPILLRQ QGSWEDAMFT DWFCVDEPDS SPEASTTSKS FEEAAKEEEE  300
GEEEECVRDE AKAEQQLLHQ AQSLTTRTAI QDENHHDGGG ASLSCDSAGA SWPADLAHYE  360
SEFLSSHLQH QIPLVSAAAA VPAPVQSVKL LEPQVQKPPA AIPQATPPHR RSAAFPEATA  420
MSFMKQEKNN FFLLEPVTMS CRSSSNWPDE IPQQEKKKLQ LLQAKQDDTN IELQEQQQQQ  480
INSSQKLESP QLEKKKVARN SQRMVKAGPW QQEEPHYRGV RQRPWGKYAA EIRDSARQGA  540
RIWLGTFDRA VEAAEAYDTA AFQMRGSRAL LNFPLRASSL AVSPPPPSPA AAPNTSSNVA  600
NPLMLSSSNI ANPLTLSHSN ASAILDPYKG SAAMSELLED RIAADSMNLA ASENLSGSSD  660
VTAANKKRSR PEQKNNTAAA AAAADLSSEL NCFHFEDLHP CKKTTTTTSS SSTSTGSYME  720
SYNGGDSSEN SVQERKEEKL ELQDLGEEYL EQLLMSSSSS ESAEMKMVDL DLLSTVKNRP  780
RILTSFSARS FELLLNVLPS *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-27516576262ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.13e-23ethylene responsive element binding factor 1