PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0040s0189.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 449aa    MW: 48229.4 Da    PI: 5.4423
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0040s0189.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-19266316255
                   AP2   2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 
                           +++GVr+++ +g+++AeIrd       + +r++lg+f+taeeAa a+++a++k++g
  Sphfalx0040s0189.1.p 266 HFRGVRQRP-WGKYAAEIRD----SarQGARVWLGTFDTAEEAALAYDRAALKMRG 316
                           69*******.**********....33334*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.54E-32265324No hitNo description
PfamPF008471.1E-14266316IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.7E-31266325IPR001471AP2/ERF domain
SMARTSM003801.8E-37266330IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-23266325IPR016177DNA-binding domain
PROSITE profilePS5103223.301266324IPR001471AP2/ERF domain
PRINTSPR003671.4E-10267278IPR001471AP2/ERF domain
PRINTSPR003671.4E-10290306IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001944Biological Processvasculature development
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0051301Biological Processcell division
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    Send to blast
MKYNSSETPS SDMSSCSSFT KFSQDEAETP SFQGPPSDVW PEVSDPLSGL SVETSTLRGG  60
GENSWSEQGS CVTERIDSSP SPASSSYLGT HLPLPNLSLP SRTRELTNVG ILDNFTNRSQ  120
TLGGGTTPLL QQQLQQQSPS WPLSPLWGGK RVCGTPPGLR SQQFINGSSA LPLDENDSED  180
MCIFDILQEA ASSGWEESIA PLSAMDSPAT TPETTTVHVD HQPVVMKQEP GPACHENPHP  240
RSTSGAPGAS NPRTPVKPPQ QQPKQHFRGV RQRPWGKYAA EIRDSARQGA RVWLGTFDTA  300
EEAALAYDRA ALKMRGSRAL LNFPLLATTA LSNPASMDVP AATLLKNLRN PASTVADTAA  360
PMVSSVHPTL ATMVTTPSGN SRSCSRGHSK KRSRDVEETV SQMQQELNST QNKHARMQGS  420
FPDAAAVQEL ESKYLEDLMS SLSSDIQQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A7e-31265325161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.17e-30ethylene responsive element binding factor 1