PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0047s0025.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 431aa    MW: 45435.1 Da    PI: 4.7382
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0047s0025.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.3e-2083132255
                   AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                            y+GVr++  +g+WvAeIr+p   + r  r +lg++gtaeeAa a+++a++ l+g
  Sphfalx0047s0025.1.p  83 IYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTYGTAEEAALAYDEAARVLYG 132
                           69****999.**********8...3.35**********************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.6E-1482132IPR001471AP2/ERF domain
CDDcd000181.91E-2982141No hitNo description
SuperFamilySSF541717.19E-2183141IPR016177DNA-binding domain
PROSITE profilePS5103221.69483140IPR001471AP2/ERF domain
SMARTSM003801.8E-3483146IPR001471AP2/ERF domain
PRINTSPR003674.3E-108495IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.6E-2984141IPR001471AP2/ERF domain
PRINTSPR003674.3E-10106122IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    Send to blast
MQHGSSVAET LAWWATQNQK NNNYSSSRRG AATAGGGSTH HHSDQADYSL DRGPRKNIRK  60
APAKGSKKGC MKGKGGPENA KCIYRGVRQR TWGKWVAEIR EPNRGSRLWL GTYGTAEEAA  120
LAYDEAARVL YGSCALLNMP DGVPSAPNSA ACTPTSSAAQ HAPSEQLPSS ASVSGLDSRV  180
SREVEATTMS AASATTKPEP HDANLDTADS GSPRKLAAEA ELPESSSNWL TAAEVKHEFG  240
GGGAGGGSRS QAAAVVAADN QRALDLETTR EQALEDCPDL LDCNFDFLDM KLDEEDLLPH  300
LLTRTPSNAS TMTNSSSYSK ELWANLACQM TISDGTFSSN VSNDSTLTAS VENGGGGDSA  360
AAPAAPAELT LEEIEPLIGQ DFIFEGSPEM EMSVSSPEVQ MLETSSLMKK KESWSALLHT  420
PPDLLPQKGA *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-1884145668ATERF1
3gcc_A9e-1884145668ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024386081.19e-87uncharacterized protein LOC112287371
TrEMBLA0A2K1JYP72e-85A0A2K1JYP7_PHYPA; Uncharacterized protein
STRINGPP1S120_13V6.12e-75(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.12e-24ERF family protein