PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0051s0010.2.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 505aa    MW: 55149.2 Da    PI: 4.2217
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0051s0010.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.21.3e-1567116255
                   AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                           ++ GVr+++ +grWvAeI+d +   ++ r +lg+f+ ae+Aa+a+++a+  l+g
  Sphfalx0051s0010.2.p  67 RFLGVRQRP-SGRWVAEIKDTT---QKIRLWLGTFDCAEDAARAYDEAAWMLRG 116
                           577******.7*********32...35*********************976665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.47E-2966123No hitNo description
PROSITE profilePS5103219.36167124IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.0E-2667124IPR001471AP2/ERF domain
SMARTSM003801.2E-3167130IPR001471AP2/ERF domain
PRINTSPR003671.8E-66879IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-1868124IPR016177DNA-binding domain
PfamPF008471.1E-1070116IPR001471AP2/ERF domain
PRINTSPR003671.8E-690106IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    Send to blast
MEQQQLVTSS GGSVWELHNN KHDAVLDDLV EAKQQQQQQR GPARGGALKS LPLAATRGGR  60
SSRNNKRFLG VRQRPSGRWV AEIKDTTQKI RLWLGTFDCA EDAARAYDEA AWMLRGSNTR  120
TNFMPAASAA SGSGGNTFSL SPSSKSARLL LHHHHHRSSK LESSAEAAAD DDDAAEVAAI  180
SSTPQDVSKT DDHPSETEDS FACCCTPALD VLPTANEFEI PVTSEAAEHY SIPSSGEFDF  240
AAPPTPAAET SVCMVVSNQE LHEDVEVVDR QREYNSTSSS SNGSSSSDMI PDSNCSYSST  300
EESLTLFPEM DHKEWLKGFA VTEQQYHEVG MMSDDDSRCC SYSSSPPTAQ SLMNFPEIGD  360
RKWLEPIRRE RQYLETQPPL QDADDDGTSA GYIAVEDGSE DLHYYTTSFD FSATDLEPLE  420
KVPDTTSSLE EPALSDDTVL LNQHFLKMKV ECSTPLSLCD PNVFQQECLL LSSSSPAEDQ  480
GGESSSQDQV IWNSWDLAPI CLVS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1357132380Ethylene-responsive transcription factor ERF096
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-20related to AP2 11