PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0055s0007.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 286aa    MW: 31097.5 Da    PI: 4.0533
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0055s0007.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-184795355
                   AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                          y+GVr +  +g+Wv+eIr+p   +kr r++lg+f tae+Aa+a++aa  +l+g
  Sphfalx0055s0007.1.p 47 YRGVRMRT-WGKWVSEIREP---NKRSRIWLGSFPTAEMAARAYDAAVVALRG 95
                          9****998.**********9...336**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.19646103IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.8E-3246105IPR001471AP2/ERF domain
SMARTSM003802.8E-3646109IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-2246105IPR016177DNA-binding domain
PfamPF008474.3E-114795IPR001471AP2/ERF domain
PRINTSPR003674.6E-104758IPR001471AP2/ERF domain
CDDcd000183.36E-3147105No hitNo description
PRINTSPR003674.6E-106985IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MVKKKESPSL SAKRGQRRSL APLKGNSSAG SIQKEGSSSA SPNGKAYRGV RMRTWGKWVS  60
EIREPNKRSR IWLGSFPTAE MAARAYDAAV VALRGPNAPL NFPDSPPTLQ IHDTLSPRAI  120
QAAAAAAAAS AVPPAAAPHQ ANQDSQERSD SSYEDDDQDP EEEEEDKYEI TQEDEEELLS  180
PSAESETGGA EAAPQITNDQ EESRLQSNSE AAQATGLEWI EAEFGQFEDV EQTVDSFPQL  240
SFPEADEMDS ILSSQPQQGQ SALDSQVLDE DEPESFEPSL WSYHW*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-1636103572Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G06746.11e-21related to AP2 9