PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0055s0083.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family MYB_related
Protein Properties Length: 157aa    MW: 17592.1 Da    PI: 10.2839
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0055s0083.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.33.7e-1379120447
                           S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
       Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                           WT eE +++++a k +G++ +++Ia+ +g +R+  q++ + qky
  Sphfalx0055s0083.1.p  79 WTNEERQRFKKALKTFGTD-FSAIAKFVG-TRSSTQVRTHAQKY 120
                           *******************.*********.*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.1871125IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.1E-775124IPR009057Homeodomain-like
SMARTSM007173.2E-1175123IPR001005SANT/Myb domain
SuperFamilySSF466893.07E-1276124IPR009057Homeodomain-like
TIGRFAMsTIGR015576.1E-977123IPR006447Myb domain, plants
PfamPF002495.5E-1278120IPR001005SANT/Myb domain
CDDcd001671.51E-979120No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MEKCGMILTP ITSAAARSAA TKSVMPEHYL QNMDTLGLQQ LEHLEKELEQ AKQKILVLKA  60
QEHCETTSPD SKVSESRYWT NEERQRFKKA LKTFGTDFSA IAKFVGTRSS TQVRTHAQKY  120
YAKLIRDYKR SGKSGSATIK AGREEMKGAT NRLTAM*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024380186.15e-78myb-like protein I
TrEMBLA0A2K1KBB11e-76A0A2K1KBB1_PHYPA; Uncharacterized protein
STRINGPP1S87_134V6.12e-77(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37260.12e-11MYB_related family protein