PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0057s0048.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

VOZ

Protein Properties

Length: 244aa MW: 27301.1 Da PI: 4.5248

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0057s0048.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	117.4	1.5e-36	129	229	93	202
VOZ 93 aelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldala 181 a+lfd+++l+ge ++e lffdkp afesg kq gwh srkqvmkefggl syymdpqp++ fe hl+eye+++ ++a Sphfalx0057s0048.1.p 129 ADLFDVAILHGEVLQERLFFDKPCCAFESGPWKQ---------GWHGSRKQVMKEFGGLNCSYYMDPQPMGLFERHLFEYELSSWTDCA 208 68***************************998.........9***************************************** PP VOZ 182 lyrlelklvdekksakgkvsk 202 ly+lelk+vd+ k + ++v Sphfalx0057s0048.1.p 209 LYKLELKQVDASKKNLSQVEG 229 *********9999888865 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence Send to blast
MHQMLQEWKV ELHETSLASS LLAKPNSSEL SSNMEWLLQL NNEKDDSSSI TLTPPMTNLP 60 LEVANIFPPS IAFLNPKCAL WDCPRPAQGG DEGLVYCSSF HEELALSEGA PGMCLVLRPG 120 GIDLKDTFAD LFDVAILHGE VLQERLFFDK PCCAFESGPW KQGWHGSRKQ VMKEFGGLNC 180 SYYMDPQPMG LFERHLFEYE LSSWTDCALY KLELKQVDAS KKNLSQVEGQ NMFPSLVDSR 240 NSS*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024378749.1	4e-66	transcription factor VOZ1-like isoform X1
Refseq	XP_024378752.1	1e-66	transcription factor VOZ1-like isoform X3
Swissprot	Q9SGQ0	5e-55	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	V6BQR5	1e-66	V6BQR5_9BRYO; Vascular plant one zinc finger transcription factor protein (Fragment)
STRING	PP1S113_68V6.1	1e-65	(Physcomitrella patens)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	2e-57	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	Sphfalx0057s0048.1.p

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]