PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0060s0086.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 148aa    MW: 16777.7 Da    PI: 10.0544
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0060s0086.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.43.5e-134688348
                   AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
                          ++GVr ++  ++Wv eIr  s   ++++++lg++ t++eAa+a++ 
  Sphfalx0060s0086.1.p 46 FRGVRHRPELNKWVTEIRPTS---QKRKIWLGTYETPQEAARAYDV 88
                          89**************99942...35******************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.8E-1945103IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-1345102IPR016177DNA-binding domain
PROSITE profilePS5103215.90945112IPR001471AP2/ERF domain
SMARTSM003802.9E-1245108IPR001471AP2/ERF domain
CDDcd000181.12E-144688No hitNo description
PfamPF008472.8E-94687IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    Send to blast
MRLHSSPERT YKSRNIDLNK EPPWEYTDDA SSTGTGGGGG GDSATFRGVR HRPELNKWVT  60
EIRPTSQKRK IWLGTYETPQ EAARAYDVGI YYTRKKIPYN FKDSPDHLLN HPISSELPWE  120
TFAAMVKQKA TSAAKRHRVN LQEATTQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024361002.15e-62ethylene-responsive transcription factor ERF110-like
RefseqXP_024361003.15e-62ethylene-responsive transcription factor ERF110-like
RefseqXP_024361005.15e-62ethylene-responsive transcription factor ERF110-like
RefseqXP_024361006.15e-62ethylene-responsive transcription factor ERF110-like
TrEMBLA0A144LHF62e-61A0A144LHF6_9BRYO; Dehydration-responsive element-binding protein 5-9
STRINGPP1S225_102V6.12e-61(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46768.15e-14related to AP2 1