PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0061s0044.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 285aa    MW: 31122.3 Da    PI: 4.7705
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0061s0044.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.73.3e-1952101255
                   AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            ykGVr +  +g+Wv+eIr+p   +kr r++lg+f tae+Aa+a++aa ++l+g
  Sphfalx0061s0044.1.p  52 SYKGVRMRT-WGKWVSEIREP---NKRSRIWLGSFPTAEMAARAYDAAVLALRG 101
                           69****998.**********9...336*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.34E-3151111No hitNo description
Gene3DG3DSA:3.30.730.101.4E-3152110IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-2152109IPR016177DNA-binding domain
PfamPF008473.3E-1252101IPR001471AP2/ERF domain
PROSITE profilePS5103223.22252109IPR001471AP2/ERF domain
SMARTSM003806.7E-3752115IPR001471AP2/ERF domain
PRINTSPR003671.5E-95364IPR001471AP2/ERF domain
PRINTSPR003671.5E-97591IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MVNSASPVTG KRIEGSDLAG APLKRKSAGS PGSIQKRSCS SSPSSTNRGG KSYKGVRMRT  60
WGKWVSEIRE PNKRSRIWLG SFPTAEMAAR AYDAAVLALR GPNAPLNFPE TPPVLQARDW  120
SSAAHMSPRS IQAAAAAAAA SAVPPAAPLH IPQSHQQTSN TFCRSGPSCC SGEEEEEDQE  180
ELHKKYPDHY NQLASLKDDE NLNLAAESQS GAPQSDQQSR VQSMPEAQQL IGMEWIESQF  240
AGPFQDFEEL GYFHHQSVLR EIEEDDDDDD DDSEFAPFLW SYLL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-1650109363ATERF1
3gcc_A5e-1650109363ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50260.11e-21cooperatively regulated by ethylene and jasmonate 1