PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0066s0025.2.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family bZIP
Protein Properties Length: 331aa    MW: 36724.6 Da    PI: 7.6956
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0066s0025.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.48.4e-104887443
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43
                          +k+ rr+++NReAAr+sR+RKka++++Le    +L +  +
  Sphfalx0066s0025.2.p 48 SKALRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQLEQ 87
                          7999*************************86555544443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.3E-84294No hitNo description
SMARTSM003383.4E-645108IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.1744791IPR004827Basic-leucine zipper domain
PfamPF001706.9E-74988IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.13E-75094No hitNo description
PROSITE patternPS0003605267IPR004827Basic-leucine zipper domain
PfamPF141442.0E-34130205IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MADNSPRTDT STDLEADAKV DNWLDDGHHG TTGVSTASDH ETTKNGDSKA LRRLAQNREA  60
ARKSRLRKKA YVQQLESSRI KLNQLEQELQ RARQQNPHSA SANGVNVAIN PGATAFDMEY  120
ARWVEEQQRQ MCELRAALQA HVADNELRLL VDGGMAHYDD IFRLKAVAAK ADVFHLVSGM  180
WKTPAERCFM WMGGFRPSEL LKILIPQIEP LTEQQLLGIC NLQQSSQQAE DALSQGMEAL  240
QQSLADIVAG GLLGSSPNVA NYMGQMAMAM GKLGTLESFV RQADHLRQQT LQQMHRILTT  300
RQAARGLLAM GDYFARLRAL SSLWSARPRD *
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024379754.10.0transcription factor TGA6-like isoform X2
SwissprotP239231e-155HBP1B_WHEAT; Transcription factor HBP-1b(c38)
TrEMBLA0A2R6XAQ20.0A0A2R6XAQ2_MARPO; Uncharacterized protein
STRINGPP1S258_7V6.11e-178(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-136TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Tabata T,Nakayama T,Mikami K,Iwabuchi M
    HBP-1a and HBP-1b: leucine zipper-type transcription factors of wheat.
    EMBO J., 1991. 10(6): p. 1459-67
    [PMID:2026143]