PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0068s0009.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

S1Fa-like

Protein Properties

Length: 87aa MW: 9216.87 Da PI: 10.423

Description

S1Fa-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0068s0009.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	S1FA	105.6	2.8e-33	25	85	9	69
S1FA 9 kGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPG 69 G+nPGl vl+vv g +l+f vgny+lyvyaqk lPPrkkkPvskkklkre+lk G+a+ G Sphfalx0068s0009.1.p 25 VGFNPGLTVLVVVVGAVLIFAVGNYMLYVYAQKHLPPRKKKPVSKKKLKRERLKSGMAPAG 85 59*******************************************************9988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04689	2.7E-31	24	85	IPR006779	DNA binding protein S1FA

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 87 aa Download sequence Send to blast
MADEFGSADV DPSAFIGQGG IDQKVGFNPG LTVLVVVVGA VLIFAVGNYM LYVYAQKHLP 60 PRKKKPVSKK KLKRERLKSG MAPAGD*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010104121.2	6e-19	DNA-binding protein S1FA
Refseq	XP_024026346.1	6e-19	DNA-binding protein S1FA
TrEMBL	A0A2K1LBK9	4e-21	A0A2K1LBK9_PHYPA; Uncharacterized protein
STRING	PP1S163_90V6.1	7e-22	(Physcomitrella patens)

Link Out ? help Back to Top
Phytozome	Sphfalx0068s0009.1.p