PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0072s0070.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 137aa    MW: 15760.7 Da    PI: 10.3327
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0072s0070.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.61.5e-133376248
                   AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
                          +++GVr ++  ++Wv eIr  s   ++++++lg++ t++eAa+a++a
  Sphfalx0072s0070.1.p 33 QFRGVRHRRELKKWVTEIRPTS---QKRKIWLGTYETPQEAARAYDA 76
                          59***************99942...35*******************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.31E-143279No hitNo description
PROSITE profilePS5103214.8033393IPR001471AP2/ERF domain
SMARTSM003804.9E-123396IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.4E-193391IPR001471AP2/ERF domain
SuperFamilySSF541715.1E-133390IPR016177DNA-binding domain
PfamPF008472.4E-93476IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
INYKLRNIDL NKEPPPAWDT DECASSGNSS TAQFRGVRHR RELKKWVTEI RPTSQKRKIW  60
LGTYETPQEA ARAYDAGIFY TKKKIPYNFE DSPHQLRNHP IPTELPWENF AALVKQRATS  120
AAKRHRANVQ DQATAQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024402755.19e-66pathogenesis-related genes transcriptional activator PTI6-like
RefseqXP_024402756.19e-66pathogenesis-related genes transcriptional activator PTI6-like
TrEMBLA0A144LHF66e-65A0A144LHF6_9BRYO; Dehydration-responsive element-binding protein 5-9
STRINGPP1S17_332V6.13e-65(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.14e-14ERF family protein