PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0074s0034.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 331aa    MW: 36250.5 Da    PI: 4.9287
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0074s0034.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.61.5e-08811241153
                   AP2  11 krgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkl 53 
                             g+Wv+e r     +  +++++++g+f t+eeA  a++aa   l
  Sphfalx0074s0034.1.p  81 APGKWVVEFRFR-ASNwtRSTQVWIGSFATEEEAMFAYDAAQHFL 124
                           5799****6662.2456667********************98776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103213.31471134IPR001471AP2/ERF domain
SuperFamilySSF541712.88E-873134IPR016177DNA-binding domain
PfamPF008471.5E-573125IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.8E-1074134IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MSDRRLSDDT IRTVLLQHEG DEAGCRLPHP QRVRAENFGC SAHRKPKHPV EERRAGLQEL  60
PARPMRRSVG GSPGVRQRLG APGKWVVEFR FRASNWTRST QVWIGSFATE EEAMFAYDAA  120
QHFLGNPTYY FDYPEGFFES CPPRFKNKPM TKDFAAFVKE KANQYATRNR ELKPNVLIFE  180
ARTSTNQLVV LAGDREEAGA TSDIEVTLVK SAAAGAGRPG GTSALEVTSL SLSADFKLIS  240
DGAVEVTQLV CYNPSQTTPH ESTFAEDGVN WSDSDGLPPL DGLELYVCSP DEISKMDSFL  300
IAGFDLNLDE VPTPEGASGS IVASLETPFP *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65130.12e-08ERF family protein