PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0077s0082.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 419aa    MW: 45379.4 Da    PI: 5.9622
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0077s0082.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96e-193383155
                   AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                          + y+GVr+++ +g Wv eIr p++   ++r++lg+f t+e+Aa+a++aa+++l+g
  Sphfalx0077s0082.1.p 33 PVYRGVRRRS-WGVWVTEIRRPKK---KTRIWLGSFATPEMAARAYDAAALALRG 83
                          68*****887.**********854...6*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.8E-133383IPR001471AP2/ERF domain
PROSITE profilePS5103223.2223491IPR001471AP2/ERF domain
SMARTSM003801.7E-353497IPR001471AP2/ERF domain
SuperFamilySSF541715.69E-203492IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.2E-303492IPR001471AP2/ERF domain
CDDcd000183.32E-173593No hitNo description
PRINTSPR003676.6E-123546IPR001471AP2/ERF domain
PRINTSPR003676.6E-127393IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    Send to blast
MGWKDAANEE SRVATSTEQM DMSAAEGHGC LHPVYRGVRR RSWGVWVTEI RRPKKKTRIW  60
LGSFATPEMA ARAYDAAALA LRGSNALLNF PEHSPSLPRP LDLSDKSIQA AATEAAHSLA  120
RRTAAGKMLQ SRRYGAAIFE PAEATIATTS SPSASMTVES SFDTSTSTST HDQGGSRLPY  180
SPGKISKPCS VQLMATDQKP YVEYNASCST TIVERPARFY SSSASSYADN KLHQIDGAAA  240
TTTTCCYNSG IHGTTLQQAA AYNTQGGKLE DQEKKTALKP VMNFQALEHR QISSGLQELI  300
SDSEETAATA STTASWVVMQ QQQLDAAQDQ SMEARAVQRQ QRGGNYYTMD EDFILNMPSV  360
IGCLYDHALL CCQLPPPHCT TTLPEALDPS AASSQAADCD DQADSSSTSW EPHLWSYY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-162491472Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-17ERF family protein