PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0079s0090.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 203aa    MW: 22907 Da    PI: 5.0928
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0079s0090.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.3e-171463255
                   AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                          +y+G+r ++ +g+Wv+e+rdps+   r r++lg+f taeeAa a++aa  +++g
  Sphfalx0079s0090.1.p 14 RYRGIRMRR-WGKWVSEVRDPST---RSRIWLGSFRTAEEAAHAYDAALVCIRG 63
                          7*****998.**********976...5**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.2071471IPR001471AP2/ERF domain
PfamPF008471.3E-91463IPR001471AP2/ERF domain
SuperFamilySSF541714.97E-201472IPR016177DNA-binding domain
SMARTSM003806.2E-341477IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.7E-301472IPR001471AP2/ERF domain
PRINTSPR003674.8E-101526IPR001471AP2/ERF domain
CDDcd000183.18E-232273No hitNo description
PRINTSPR003674.8E-103753IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MSGRYQRSGD SQRRYRGIRM RRWGKWVSEV RDPSTRSRIW LGSFRTAEEA AHAYDAALVC  60
IRGPNSQLNF PHHLPTIPSG ITPGHYTTRQ IQAAAAASAA ASVGRPFSYS DFLSPHASDS  120
DEEEEQLEDI TYEPAAQPIN RLAMSQASSN GHNWENSVDF VDDPYEREWV QNIIFPPSPK  180
LDDSDDENDS SFVEPSLWSY RR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-15981981Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024359814.11e-50ethylene-responsive transcription factor ERF017-like
TrEMBLA0A2K1L4G93e-49A0A2K1L4G9_PHYPA; Uncharacterized protein
STRINGPP1S1_34V6.15e-50(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.11e-15ERF family protein