PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0079s0091.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 240aa    MW: 26813.8 Da    PI: 4.4952
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0079s0091.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.62.7e-171968255
                   AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                          +y+GVr ++ +g+Wv+eIrdp     +  r++lg+f +aeeAa a++aa  +++g
  Sphfalx0079s0091.1.p 19 QYRGVRMRR-WGKWVSEIRDPI----TrSRIWLGSFRSAEEAAHAYDAAVVCIRG 68
                          69****998.**********83....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.0E-291877IPR001471AP2/ERF domain
SuperFamilySSF541714.64E-201977IPR016177DNA-binding domain
PfamPF008473.8E-91968IPR001471AP2/ERF domain
PROSITE profilePS5103221.721976IPR001471AP2/ERF domain
CDDcd000189.37E-271978No hitNo description
SMARTSM003801.9E-331982IPR001471AP2/ERF domain
PRINTSPR003671.7E-92031IPR001471AP2/ERF domain
PRINTSPR003671.7E-94258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MSGRQSYQRN GGRSQPARQY RGVRMRRWGK WVSEIRDPIT RSRIWLGSFR SAEEAAHAYD  60
AAVVCIRGPN SQPNFPHHNP TIPSGTPGRY SRHEIQAAAV ASAAACVGRP FNYSEFLSPT  120
STTSDSGDEE EEEEEAEEEE LEDITYTGPS WSHQAAESVQ QQYHIVSPAT IPSYGNYSNN  180
SSYSAWSTSA AAGQQIFDDL YEREWVNSVI FPSQSPRQDD SDDEDDSFVE PISLWSYRG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-141177473Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11726RQYRGVRMRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024359814.15e-44ethylene-responsive transcription factor ERF017-like
TrEMBLA0A2K1L4G91e-42A0A2K1L4G9_PHYPA; Uncharacterized protein
STRINGPP1S1_34V6.12e-43(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.13e-18ERF family protein