PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0080s0069.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 619aa    MW: 66196 Da    PI: 8.9205
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0080s0069.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.5e-19352402256
                   AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                            y+GVr ++ +grW AeIrd       + r++lg+f+tae+Aa+a++aa+++l+g+
  Sphfalx0080s0069.1.p 352 VYRGVRKRP-WGRWSAEIRDrI----GKCRHWLGTFDTAEDAARAYDAAARNLRGA 402
                           69*******.**********33....24*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.1E-29351408IPR001471AP2/ERF domain
PfamPF008473.9E-13352401IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-21352409IPR016177DNA-binding domain
SMARTSM003801.9E-31352415IPR001471AP2/ERF domain
PROSITE profilePS5103221.931352409IPR001471AP2/ERF domain
PRINTSPR003678.1E-10353364IPR001471AP2/ERF domain
CDDcd000185.93E-17353408No hitNo description
PRINTSPR003678.1E-10375391IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 619 aa     Download sequence    Send to blast
MALHDMVLQG CSTVPKRKWR DSLTEVAAAA PWKREKLLQQ STGLLLDDSP ALMYLSGKCL  60
ICLGPTVHPF CPVCVCDYPD DIAPPQPRFQ AVTSADSSLQ QQQRHSWSNN SGSSSPPAAA  120
DLSSSSSWIS NNSGSCITDH HTQQFSNVSS SSYEQSVLLP DADLLSLCSI VPKSDAMPAA  180
ASEIHRNVQE DLEGIAAVVG PRALFGKSTT STLCTTIVSA SSEVMSSSSS FRQPAGSTPA  240
SLPHEVEAMN NSSFNNEHIY SSSTSEAAAV MLSGSSKGVQ MLRASRPLVE DVRGSASSLQ  300
ISRMKPSVKN MAKKKSYSEN LRSNSETRGG GGGLSGSKVV DVAASCSSTA RVYRGVRKRP  360
WGRWSAEIRD RIGKCRHWLG TFDTAEDAAR AYDAAARNLR GAKARTNFVI PSSCSSSPSA  420
APDQPVQFSA PEKISRARVS TGRLGVELRR DPIAPTLMQE RRSTVSAGSM MRISSTSHLH  480
AVVSSSHPVT VDRRDQYISQ QEAAALQLTA GAGVQYQLPP IRPLELDLKL GFCSPKTAAS  540
SSLEISAQEP PSAKTHNYHS IQPSSSSSAT RHHQSMQLSS SATYQSFHPS SATFQSIQQS  600
SAEFQRIQQS SSALFQLP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-173534081571Ethylene-responsive transcription factor ERF096
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.11e-20ERF family protein