PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0085s0010.2.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 259aa    MW: 29482.6 Da    PI: 7.3042
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0085s0010.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP221.94.3e-07165205247
                   AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaai 47 
                           gy+G+  ++++ +Wv eIr       r   +++lg++ t+  Aa+a +
  Sphfalx0085s0010.2.p 165 GYRGI--RPYKMKWVTEIRPT-----RdsSTIWLGSYQTPGAAARAFD 205
                           8****..6999******9995.....235**********989988865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103212.444142222IPR001471AP2/ERF domain
SMARTSM003802.5E-6165228IPR001471AP2/ERF domain
SuperFamilySSF541712.62E-8165224IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.106.0E-13166224IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MSSTMPEDGE NQQQQQQPTL QRLGQRWMLL GHVTDAWKRF SRVLRRLRSK ASCASDEAMC  60
AQLDWSNTEF NDDWFKEVAN NGIHEEEWRE AYDGQAELRS AAATTGSAET SVEVEDDRHL  120
VSEPAVHHAG VEAAGRRAEN GATRGVRRQQ QQQEEAISAA SAEHGYRGIR PYKMKWVTEI  180
RPTRDSSTIW LGSYQTPGAA ARAFDVGTFY CNKKRKHDYN FPDSIDHLPP RDEIDRLPPP  240
QRKIRIQNLA KEVAKRQH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01250.14e-13ERF family protein