PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0087s0050.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 94aa    MW: 10561.1 Da    PI: 9.9252
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0087s0050.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.44.9e-10449151
                   AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
                          +++kG+r+++  +++ +eIr p   g +k +slg++ t+eeAa a +a   
  Sphfalx0087s0050.1.p  4 PCFKGIRQKE--NKYISEIRPP---GSKKIVSLGTYATEEEAALAFDAGIF 49
                          689***9755..8********8...435***************99998655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.4E-4446IPR001471AP2/ERF domain
PROSITE profilePS5103211.957561IPR001471AP2/ERF domain
SMARTSM003802.3E-7567IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-15663IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-12663IPR016177DNA-binding domain
CDDcd000181.57E-14663No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    Send to blast
GSPPCFKGIR QKENKYISEI RPPGSKKIVS LGTYATEEEA ALAFDAGIFY FRKYNIAYNF  60
PDSPEVLPPH EPRDVSVKFI KKAARRNAER ALAS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024367815.14e-17uncharacterized protein LOC112278487
RefseqXP_024367816.14e-17uncharacterized protein LOC112278487
RefseqXP_024367817.14e-17uncharacterized protein LOC112278487
RefseqXP_024367818.14e-17uncharacterized protein LOC112278487
RefseqXP_024367819.14e-17uncharacterized protein LOC112278487
RefseqXP_024367820.14e-17uncharacterized protein LOC112278487
RefseqXP_024367821.14e-17uncharacterized protein LOC112278487
TrEMBLA9RL521e-16A9RL52_PHYPA; Predicted protein
STRINGPP1S15_214V6.12e-17(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.13e-16ERF family protein