PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0091s0017.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 215aa    MW: 23802.8 Da    PI: 7.952
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0091s0017.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.68.2e-10116157249
                   AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaa 49 
                           +++GVr  kk g++vAeIr+       +kr++lg++  ae Aa a++ a
  Sphfalx0091s0017.1.p 116 KFTGVR--KKAGSFVAEIRVsT-----KKRIWLGSYKRAEPAALAHDVA 157
                           789**6..679*********33.....5*****************9976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.5E-14116176IPR001471AP2/ERF domain
SMARTSM003801.9E-11116181IPR001471AP2/ERF domain
CDDcd000182.96E-13116175No hitNo description
PROSITE profilePS5103211.614116175IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-8118175IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
MGDGGRSRLY CPGSPGAKLR EKLRQLKDKR VGIEPDACVY ARLEPCGEFV SSSDSHRTGN  60
PEIVSEVLPT DVHRDDAEQQ GVKFDLDYAL RQPLCATDLD LEEFPGDHAA GNRQLKFTGV  120
RKKAGSFVAE IRVSTKKRIW LGSYKRAEPA ALAHDVATYL RATYLSGANP QYNFDSSPSS  180
FPPSKEISDL ETDEEKWELI KKIAGEFAKK VARR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G06746.19e-11related to AP2 9