PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0091s0019.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 505aa    MW: 55885 Da    PI: 7.1575
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0091s0019.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.62.6e-07170217247
                   AP2   2 gykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaai 47 
                           ++ G+r+  ++++Wv+e r+  +e +     kr++lg++ t +eA +a++
  Sphfalx0091s0019.1.p 170 KINGIRQ--QNNKWVVEMRVaGKEKQhlLGfKRIWLGTYYTWDEAVRARD 217
                           5668876..469********88774467557*****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510329.598162221IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-6173223IPR001471AP2/ERF domain
SuperFamilySSF541716.15E-5175223IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    Send to blast
MGDGGESEWD SATSHRSNLR VKFKESLRRL KSTRVNRGRG RKLGTACFSF RQRCQRGSSS  60
RLSSDSPEAG KGPICRANEA SDQSVVLPRL HSDDRGKRIN QLENNREEYC GEASYLAADA  120
DGTNPNSRVL ERCGNREETA NCSLVNQIVG CHDSPILHGS SGSRGPGEEK INGIRQQNNK  180
WVVEMRVAGK EKQHLLGFKR IWLGTYYTWD EAVRARDVGV FYCGKEPRRY FSPAYIPFLP  240
SLETLSVSRE PDKISASIKA LAAKNSTKPD LGTSGAPPCS HLCDSCAAAQ ALQPQTISHT  300
AHGLASLHQA QTEGFKHFQD VDQDRRAAGA IPQDQLDRAQ RDMEQAQRAA CAIPQDLEHA  360
QRNMQDQARR AAYAIPQDPD HAQRAMVPTP QPAFTNAKEL DQYQNPLYGQ RGNAQTAYNN  420
VDGSNCVIPH FVAQISDCTT AYNSAQKEAH GQSFGDHVFE SDQMENGSVD CRLSPGLLEI  480
DWTKDLMEGF DQMQCFSPLW DKLN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-