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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Sphfalx0091s0046.1.p | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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| Family | bZIP | ||||||||
| Protein Properties | Length: 503aa MW: 52706.2 Da PI: 10.057 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 45.5 | 1.6e-14 | 409 | 457 | 5 | 53 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53
+r+rr++kNRe+A rsR+RK+a++ eLe +v +L++eN +L+k+ ++k
Sphfalx0091s0046.1.p 409 RRQRRMIKNRESAARSRARKQAYQVELEAEVNQLKEENLKLRKQQVSMK 457
79************************************99998765555 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Gene3D | G3DSA:1.20.5.170 | 2.6E-14 | 399 | 458 | No hit | No description |
| SMART | SM00338 | 2.1E-9 | 405 | 463 | IPR004827 | Basic-leucine zipper domain |
| PROSITE profile | PS50217 | 11.254 | 407 | 459 | IPR004827 | Basic-leucine zipper domain |
| Pfam | PF00170 | 2.5E-13 | 409 | 458 | IPR004827 | Basic-leucine zipper domain |
| SuperFamily | SSF57959 | 9.38E-11 | 409 | 457 | No hit | No description |
| CDD | cd14707 | 2.57E-25 | 409 | 461 | No hit | No description |
| PROSITE pattern | PS00036 | 0 | 412 | 427 | IPR004827 | Basic-leucine zipper domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 503 aa Download sequence Send to blast |
MGSQSLSPRQ TQARPSSMGT NPSNPSSGSN NGGLASSTLP GGGLGRYNSL ARQSSIYSLT 60 LDEFQNTMTE PGKNFGSMNM DEFLKNIWTA EESQAMAAAM GSITDSAQAG NAGGMLTRQP 120 SLGAMSLPRT LSRKTVDQVW RDIHRDSSGG SDSGGGGLAG AAAGTMPQER EATFGEMTLE 180 DFLVKAGVVR EDAEIGSQGF SPFVGASVMT SGDIDRSVQG GSAAGDRGGA TGGDIVPTLS 240 LSPANVIPSQ ASIDAMQMDA YNKSQATTQQ QQADWFRSMA QQQQQHMLQQ QAAEAAAAAA 300 YVNAANKRMG NGAGPIVGIA GMGMGGHMGA AMGGGLPGGM HGAGLGMGLG AMRAGMDVNM 360 GLAPGSTPSP ESDGGHNGLS LSPMHYGLDG PLRGRKRGPD GPVEKVVERR QRRMIKNRES 420 AARSRARKQA YQVELEAEVN QLKEENLKLR KQQVSMKKSD RGLLWEDGGE RRKKQLMEMM 480 KMTGKTIASE VKALRRTRTA TW* |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_024363129.1 | 1e-146 | ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X3 | ||||
| TrEMBL | A0A4D6QI95 | 1e-179 | A0A4D6QI95_9BRYO; Abscisic acid-insensitive 5 | ||||
| STRING | PP1S49_161V6.1 | 1e-127 | (Physcomitrella patens) | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G49720.1 | 2e-37 | abscisic acid responsive element-binding factor 1 | ||||
| Link Out ? help Back to Top | |
|---|---|
| Phytozome | Sphfalx0091s0046.1.p |




