PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0091s0088.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 399aa    MW: 43998.4 Da    PI: 9.5447
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0091s0088.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.23.5e-12270317355
                   AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                           +kG+r+  k+++W +eIr p     +  k+++lg+f t+eeAa+a++a   ++++
  Sphfalx0091s0088.1.p 270 FKGIRQ--KDNKWISEIRPP-----SakKTVWLGTFCTPEEAARAYDAGIFYYHK 317
                           89**85..479********9.....445********************9888886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103215.554261325IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.4E-18269327IPR001471AP2/ERF domain
SMARTSM003804.6E-12269331IPR001471AP2/ERF domain
CDDcd000183.29E-16270327No hitNo description
PfamPF008471.8E-5270310IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-14271327IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    Send to blast
MAPTIGMCAA APRRQCQFLA DIKDSFERVV QGFWSSLKQR ACKSSPSCIR LLLTRRNGHF  60
SSLVNGIATW PRLASRKSRE RSSPPNAQPA SSTRPGCRYS LSFPGRGVGV PSASLDISQP  120
PHNGKFISTS FKTAKRTSSS RGYEEQQVHV MCMSTVSQNT TTLPPPFFIA SPDDDITRLW  180
NGCNQIAMEE DSKMYILDGI PEVQHRINQS AAAPEMVPQR EDVDWFSFES EGDGARGDSS  240
ITSVSENETA STAASRELQE EPRGVQRTAF KGIRQKDNKW ISEIRPPSAK KTVWLGTFCT  300
PEEAARAYDA GIFYYHKCKT PYNFPDSPTL FPAINEGQKE VSVEFVKAEA KRNAQRAWPS  360
GVPSKLTSAV QEQASSSGSS SGGWLFNPYK RRKSSNCK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-15ERF family protein