PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0096s0061.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 206aa    MW: 23180.1 Da    PI: 10.4181
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0096s0061.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.72.1e-1156101148
                   AP2   1 sgykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaia 48 
                           s+ykG+r+++  +r+ +eIr        ++++++lg++ ta eAa+a +a
  Sphfalx0096s0061.1.p  56 SRYKGIRYRPELNRYISEIRP----AlpRKRKIWLGTYKTAIEAARAFDA 101
                           79****************998....44556*****************886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.77E-1256116No hitNo description
PfamPF008472.7E-656100IPR001471AP2/ERF domain
SuperFamilySSF541712.75E-1156115IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.9E-1757116IPR001471AP2/ERF domain
SMARTSM003807.2E-757121IPR001471AP2/ERF domain
PROSITE profilePS5103213.74957115IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MSHKLDQVQS GTILYDNRVQ FTSSKLLDQL PHRSVPAAAA GQNHEVGSMN NHGQESRYKG  60
IRYRPELNRY ISEIRPALPR KRKIWLGTYK TAIEAARAFD AGIFYTGRKI PFNFPEFAKQ  120
LPPLDDNLTQ DERHTAIQKR AKLAAAMKHV VDSYDGIATT STPSSGLTSR STTTTTTQQK  180
QQQQYTSKIS NAHLPFYQFL PSPRD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G06746.11e-13related to AP2 9