PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0100s0040.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 801aa    MW: 83185.2 Da    PI: 4.6872
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0100s0040.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.92.2e-17269319155
                   AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                           + ykGVr ++ +g Wv eIr p++   ++r++lg+f +ae+Aa+a++aa+++l+g
  Sphfalx0100s0040.1.p 269 PVYKGVRKRP-WGIWVTEIRRPKK---KTRIWLGSFASAEMAARAYDAAALALRG 319
                           68********.**********854...6*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.8E-12269319IPR001471AP2/ERF domain
PROSITE profilePS5103222.985270327IPR001471AP2/ERF domain
SuperFamilySSF541713.86E-19270328IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.2E-29270329IPR001471AP2/ERF domain
SMARTSM003803.6E-34270333IPR001471AP2/ERF domain
CDDcd000183.54E-16271329No hitNo description
PRINTSPR003674.3E-11271282IPR001471AP2/ERF domain
PRINTSPR003674.3E-11309329IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 801 aa     Download sequence    Send to blast
MVESKGLYSS LYSRRSASFL RLSQAASWIY GGGGGEPEHG WSDYGIVGIE VQESGGGDVR  60
LSAAAAPAAT QEAEAEGGGG GGGDETACLQ QSSSPPGNLC HTLIGSWVLP CQPHAGGGDD  120
YEQEPCDPSR SLQQLESPLP PPGSSSSRRT RKRENSDLGE EEEDEEELYV RRARQPLLQQ  180
QGSSQFWEPG SEGRVRLGPA RDVLSEEAQE PPRGVQQQQE QDVAPEAATA AAAAAVEASN  240
ASPQSVSEAE QVAAKRGKVI SGEKDTRHPV YKGVRKRPWG IWVTEIRRPK KKTRIWLGSF  300
ASAEMAARAY DAAALALRGP AALLNFPESS ASLPRPADLS DKSIQAAATA AANMMSTTAT  360
PSSPAAAGAG SSSRVGPRVA MPEANENTGN VEGLSSSRIA SSSSSPALAG EHQYESSSLN  420
LASTTITSSQ EVFITGLEKG SLLASSSQVP AAIASSHSSA PARSSDSQKL QLLDVHVRGS  480
IAGTSSSPDK KPESSGSSSF AIPRDQPPQR IADITTSRAA ATPRPPASSN LSETKFEHLA  540
TVSKSRLAPA AVAARTMLGQ PEGAGSAATV TSSGAAVGLD SWPSTSAPTK TLPQPTMDVM  600
RTATTAAAPL PGHTVSAEEL QIMSTHVRLA THYSTTEAAA TSTGQDFKEH QGAGAAELLE  660
CSYEEEKEAA GRRPLHGDTG AAPPENLQAG AASVAAAHQR PSEPSAADRS ESGSELQGPA  720
TENQLPEESM IFQMPVAEEE GHEGQLLLPA NEVMYNAAMG VQLSPPLIMP GNEVPDHHNI  780
NTDSSGDDDA SYGDSQLWSF *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-152683271272Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.18e-19ERF family protein