PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0105s0046.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 717aa    MW: 77654.3 Da    PI: 6.5088
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0105s0046.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.4e-1773123256
                   AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                           +y+GVr+++ +gr++AeIrdp++   + r +lg+f+tae+Aa a++ a+++++g+
  Sphfalx0105s0046.1.p  73 RYRGVRRRP-WGRYAAEIRDPNT---KERKWLGTFDTAEDAAMAYDWAARSMRGA 123
                           69*******.**********933...5*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541718.5E-2173131IPR016177DNA-binding domain
PfamPF008477.3E-1173122IPR001471AP2/ERF domain
CDDcd000182.82E-2873129No hitNo description
Gene3DG3DSA:3.30.730.105.5E-2973130IPR001471AP2/ERF domain
SMARTSM003808.2E-3473136IPR001471AP2/ERF domain
PROSITE profilePS5103221.90473130IPR001471AP2/ERF domain
PRINTSPR003674.2E-97485IPR001471AP2/ERF domain
PRINTSPR003674.2E-996112IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 717 aa     Download sequence    Send to blast
MVGRIDGLQL QEQQKLSSTK LQLGLRVTRP ELSSSSSCKR KAKAVARVGV EEAANSNKKG  60
RSNSSSRSHE EGRYRGVRRR PWGRYAAEIR DPNTKERKWL GTFDTAEDAA MAYDWAARSM  120
RGAKARTNFV YQSSSHQHTT CIMSSSTSAL AATAAAASPN SKAGGGTARG AAAIDDNRQQ  180
QHHHRRQQQL GGFATKNFAP PGNAIMLAPA SKVIRKADWR TNDGLNVDLY TSSRNLHAYQ  240
SSSSVYQQYS VDKLQYAGAA AANTEGQSAV AQLDPRRSHD DHVTTALMRE EAGKESFSSA  300
GKTKQWQLLS MSRDYMLAQQ NQETFSMYEL SVPAHADATA TDQMLMSLTL PSLQVIPPDF  360
CEEPPGTAAC RPPLAVTPSC NSTMTFSSNA AGGRSVFSND LILRRQVVPK LYSEEADTLA  420
QVVAQSASLN RHTTLTTATV DGKQRQHPQQ QQQQTAATRP PPSKCLFSTQ VSYSEDSTVS  480
LPADTSSTAT PGSPGLFSLS SEAESYAASP ATAIEVSSPL HSSCSDMVTC TSPSRNPDDL  540
HSILPASLSR SCTGLLNEPQ QSPRECSWSD PAAATEIQQF QVPAELLQIL TPVAAWQSME  600
LDVKSEPEFS NWHNSMCALP AAVWQTTTSS RTAATGAMEL NGNHMIKLLD DDEQQGFFNE  660
RSSDLASCAG LLGDVVGDPV TANEFLFMES IPFPEHPLDD CHLFPFLLDE PTRIFA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-20701321174Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.14e-14ERF family protein