PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0119s0007.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 290aa    MW: 32222.1 Da    PI: 6.2456
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0119s0007.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.7e-1853102255
                   AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                           +y+GVr +  +g+Wv+eIr+p   +kr r++lg+f  +e+Aa a++aa ++l+g
  Sphfalx0119s0007.1.p  53 KYRGVRMRA-WGKWVSEIREP---NKRSRIWLGSFPNPEMAAHAYDAAVLCLRG 102
                           8*****998.**********9...336*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003807.3E-3753116IPR001471AP2/ERF domain
SuperFamilySSF541714.38E-2153112IPR016177DNA-binding domain
CDDcd000182.07E-2753109No hitNo description
PfamPF008474.1E-1153102IPR001471AP2/ERF domain
PROSITE profilePS5103222.73453110IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.7E-3153112IPR001471AP2/ERF domain
PRINTSPR003671.3E-115465IPR001471AP2/ERF domain
PRINTSPR003671.3E-1192112IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MVEKQRTQGG RSGLEIRRGL ELLKLVKKKP TKKEAASSSL SSSSSSSSSH HGKYRGVRMR  60
AWGKWVSEIR EPNKRSRIWL GSFPNPEMAA HAYDAAVLCL RGPKAFLNFP ESVPSSSPPP  120
SHCLSPKEIQ AFSAAHAVSA CSPIISLTTS SHFLSADSQL SEEKDLHSDP ASPRLVKAEA  180
EEEVQPLQVH FTEQISAAMD YRIVTTRKVE EEAARECSET SWKCCRPEEE DDVQSLLQNF  240
KEIEFPPVVV PGDFLHSGDS TSFFFADNAA YPKMDSENFW EENLWSFSN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-1740117179Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024377709.19e-40uncharacterized protein LOC112283351
TrEMBLA0A2K1KGA62e-38A0A2K1KGA6_PHYPA; Uncharacterized protein
STRINGPP1S14_196V6.14e-39(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36900.16e-26related to AP2 10