PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0122s0021.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 209aa    MW: 23198 Da    PI: 4.9295
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0122s0021.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.6e-181665255
                   AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                          +y+GVr ++ +g+Wv+eIrdp++   r+r++lg+f +aeeAa a++aa  +++g
  Sphfalx0122s0021.1.p 16 QYRGVRLRR-WGKWVCEIRDPTT---RTRIWLGSFRSAEEAAHAYDAAVVCIRG 65
                          69****998.**********976...5**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.107.2E-301574IPR001471AP2/ERF domain
CDDcd000183.76E-251675No hitNo description
PfamPF008471.1E-101665IPR001471AP2/ERF domain
PROSITE profilePS5103221.4961673IPR001471AP2/ERF domain
SuperFamilySSF541711.9E-201674IPR016177DNA-binding domain
SMARTSM003807.9E-321679IPR001471AP2/ERF domain
PRINTSPR003671.8E-91728IPR001471AP2/ERF domain
PRINTSPR003671.8E-93955IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MSGTSARRGE ASSHRQYRGV RLRRWGKWVC EIRDPTTRTR IWLGSFRSAE EAAHAYDAAV  60
VCIRGPNSQP NFPHHTPTIP SGTPDHYTRR EIQAAAAASA AASVGRPFDY SGFRSPDASE  120
MSANEGGEEL EDITYTDGNQ QESAPDQATA QTRISNNNWS CNTGTNFDDP YEREWVNNMI  180
YAPAGPAKDD SDDDNNSFVE ASLWNYWR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-16874673Ethylene-responsive transcription factor ERF096
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00463DAPTransfer from AT4G31060Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024359814.14e-45ethylene-responsive transcription factor ERF017-like
TrEMBLA0A2K1L4G99e-44A0A2K1L4G9_PHYPA; Uncharacterized protein
STRINGPP1S1_34V6.11e-44(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.12e-18ERF family protein