PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0130s0011.2.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family bZIP
Protein Properties Length: 329aa    MW: 36421.1 Da    PI: 8.1324
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0130s0011.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.83.5e-114483443
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43
                          +k+ rr+++NReAAr+sR+RKka++++Le    +L +  +
  Sphfalx0130s0011.2.p 44 SKALRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQLEQ 83
                          7999*************************85555544433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.6E-44194IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.9E-84290No hitNo description
PROSITE profilePS502179.1744387IPR004827Basic-leucine zipper domain
PfamPF001707.5E-74584IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.0E-74588No hitNo description
PROSITE patternPS0003604863IPR004827Basic-leucine zipper domain
PfamPF141449.8E-34128203IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MADNSPRTDT STDLEADAKL DDGHHGATVV SNTSDHEATR NGDSKALRRL AQNREAARKS  60
RLRKKAYVQQ LESSRIKLNQ LEQELQRARQ QNPHSGGGTN GVNVTTLNPG AAAFDMEYGR  120
WVEEQHRQMC ELRTALHAHV ADNELRLLVD GGMAHYDDIF RLKAVAAKAD VFHLVSGMWR  180
TPAERCFMWM GGFRPSELLK ILIPQIEPLT EQQVLGICNL QQSSQQAEDA LSQGMEALQQ  240
SLADTVAGGL LGSSPNVANY MGQMAMAMGK LGTLETFVRQ ADSLRQQTLQ QMHRILTTRQ  300
AARGLLAMGD YFARLRALSS LWSARPRE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024379747.10.0transcription factor TGA6-like isoform X1
SwissprotQ6IVC31e-156TGA22_ORYSJ; Transcription factor TGA2.2
TrEMBLA0A2R6XAL30.0A0A2R6XAL3_MARPO; Uncharacterized protein
STRINGPP1S30_324V6.40.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-135TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Chern M,Fitzgerald HA,Canlas PE,Navarre DA,Ronald PC
    Overexpression of a rice NPR1 homolog leads to constitutive activation of defense response and hypersensitivity to light.
    Mol. Plant Microbe Interact., 2005. 18(6): p. 511-20
    [PMID:15986920]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]