PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0134s0025.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 642aa    MW: 69836.9 Da    PI: 5.9769
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0134s0025.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.23.5e-173180255
                   AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                          +y+GVr+++ +gr++AeIrdp++   + r +lg+f+tae+Aa a++ a+++++g
  Sphfalx0134s0025.1.p 31 RYRGVRRRP-WGRFAAEIRDPNT---KERKWLGTFDTAEDAAMAYDWAARSMRG 80
                          69*******.**********933...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.8E-113180IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.6E-293187IPR001471AP2/ERF domain
SMARTSM003801.4E-333194IPR001471AP2/ERF domain
CDDcd000183.38E-283187No hitNo description
SuperFamilySSF541717.19E-213188IPR016177DNA-binding domain
PROSITE profilePS5103221.9833188IPR001471AP2/ERF domain
PRINTSPR003674.0E-93243IPR001471AP2/ERF domain
PRINTSPR003674.0E-95470IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 642 aa     Download sequence    Send to blast
MRAAASSCAR RKVGVDQAKK KGRKSSREPG RYRGVRRRPW GRFAAEIRDP NTKERKWLGT  60
FDTAEDAAMA YDWAARSMRG SKARTNFVYP MHNTCSLMQS SAPAPTSQNS SRGRASPHGN  120
IRFHRQQEHH LTAANFSPGN LLLAPATSKL AVGKADWTTS CGLFNDLQQT SASQIADYEA  180
VERLAEAISD VRVPAAASLQ QQQQQMDHHR RFREHHVTST MKEEVKLESA PVGRRLQWLP  240
SDYAYECAMG FESVPPCAAS KISSSLMPAV PSLQAIPGFP GEDPPGTCGL VSPSCNSTMT  300
FSNEAATVSH QSLFSSTVSL FNDQFPQDLS KYCEVVEAGT LAQVVAQSMD FNRSFLKATA  360
EKLPHEQQKE QRTPPTPPRK CMLSTQVSYS EDSTHEHADS DVSTQGTTGL CSLSSTTEAE  420
ESYATGANVG GAEVSSPAAA VCNSTTTTSA MMITSPSRNP DNLNSILPAS LNPTGQLASQ  480
QSSRGEWPAW VAKPAEAAVH EIPQLQTCTP AAAAAFASCW QDVCALPAVW RIPQDEKLTL  540
ADTPRSETDV LGYQKLDDDW QAAEYVTRAA ATDQQHFTTT GLLGDVVGDP FAANYYDILS  600
MESLIPFPEQ HQYPVDATDC QLFPLDDCQF SMVTLCQPLQ F*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-212287571Ethylene-responsive transcription factor ERF096
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11938KKGRKSSREPGRYRGVRRRP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.11e-13ERF family protein