PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0137s0052.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family Trihelix
Protein Properties Length: 319aa    MW: 35577.9 Da    PI: 8.312
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0137s0052.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix52.71.1e-1630113279
              trihelix   2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 
                           Wt +e+ +Li+a++ +++r  +g+       ++ +W++v +++++ g++rs++qC++kw+nl ++ykk+++ e++  +e  s +
  Sphfalx0137s0052.1.p  30 WTLHETVTLITAKKLDDQRRLKGSekeksrPAELRWKWVENYCWKNGCQRSQNQCNDKWDNLLRDYKKVRDYESRYPPEPISYW 113
                           **************77777776533334448899***************************************99766666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.0732292IPR017877Myb-like domain
PfamPF138371.8E-1229115No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MAEANPNQQQ LALVEVQVKP EDREYRKGNW TLHETVTLIT AKKLDDQRRL KGSEKEKSRP  60
AELRWKWVEN YCWKNGCQRS QNQCNDKWDN LLRDYKKVRD YESRYPPEPI SYWQMEKHER  120
KEKGLPSNLL QQVYQTLHDV IDRRFPTPKL PQQLPGPSTD LNPSGSGQQQ QQLPHPLLRP  180
SSPIQQPSAQ KQPAAPTDTA TAHSLSGDDS SEEEETAAAG AKRRKTTMSG GGGGGAEAIA  240
PAMFKSTVEI TQTLLACEDK KDRRHRDLLG VEERKLHIEE AKTEISRAGV AGLITAVNNL  300
ASAILTLAAD KTAGGDTL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002960379.14e-98trihelix transcription factor ASR3
RefseqXP_002967337.14e-98trihelix transcription factor ASR3
TrEMBLD8QR481e-96D8QR48_SELML; Uncharacterized protein
STRINGEFJ319362e-97(Selaginella moellendorffii)
STRINGEFJ379182e-97(Selaginella moellendorffii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.14e-52Trihelix family protein