PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0139s0002.2.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family C2H2
Protein Properties Length: 182aa    MW: 20477.7 Da    PI: 8.0528
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0139s0002.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.10.0002985104322
                           ETTTTEEESSHHHHHHHHHH CS
               zf-C2H2   3 CpdCgksFsrksnLkrHirt 22 
                           C+ Cg sF +   + +H+r+
  Sphfalx0139s0002.2.p  85 CSTCGPSFEDMAKYSSHLRK 104
                           ******************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF029922.7E-291127IPR004242Transposon, En/Spm-like
PROSITE profilePS501578.66383115IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MKKGFLLLSL IIPGPSKVKN LDTYLALVVD ELKTLWDGVW AYDGRKTTGG IPRVFKLRAI  60
CMWTMHDYPG FGFVSGLQTQ GYKACSTCGP SFEDMAKYSS HLRKIVYLGH TKFLPLGHDM  120
RSDPLLFSSF DMPYGDERDI PEATTFAYWR DVANRVIDLN DSMVFEGSGL TRWGILNSLP  180
Y*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-